|
Name : SN31241_5790 (SN31241_5790) Accession : YP_008358497.1 Strain : Salmonella enterica USMARC-S3124.1 Genome accession: NC_021902 Putative virulence/resistance : Virulence Product : Bacteriocin/lantibiotic ABC transporter Function : - COG functional category : - COG ID : - EC number : - Position : 602264 - 604330 bp Length : 2067 bp Strand : + Note : ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain COG2274; Bacteriocin/lantibiotic ABC transporter of Bacteria UniRef RepID=E8NUS0_SALET DNA sequence : ATGGATAAAAAACTAGAACCTTATTATTTAAGTGCGGAAACGGCATTATCTATAGTGTCTAAAAAATTCAACATAAAAAT TGATATCAAAGAGGATGATATAAATTTAAGATTTAAAAAGTACGACAGAAATAACACTGATGACTCTATACAAATGAAGA ATTTCTTTTTGTCGTTAGGGCTTTCTCTACAGGATATATTATTTAATAATGGTGAGGATTTACTAAATGAGCCTATGCCG ATTTTACTATTAACACCAGAAATGAAGTGGATGGTGTGTGTGAGCGGCGGGCAAAAAATAAAGTTGGTAAACGCGCGCGG TGAACTCTGTTATGTTGAAATTGAAGATGAATATTTAAAAGAGTTATCTGCATTTAGTATACTACCTTTAAATAAAGTTG TTGATAGTATAAGAGTAAAAAATATCATAAAAAACTCTTTATCGATGAACAAGATTTTTTATACTAAATACTTTTTTTCA TCTCTTTTTATGGCAATTTTTGCGTTAACTATCCCAGTATTTAGTAATCTGTTCTATGATAAGCTTGTTCCAAGCGCTTC GGTTTCATCTTTATTTGGCGTGGCTATAATTGTTGCTGTATTTATTGTTTTTGAGTTTATCCTTCGTACTTCGAAAGATA TTTATCAGTCTATCACAGCAAGGCAGGATGACGTCGATATTGATATCGCATTTCTTGAAGCGGTACTTTATAGTAAAAAG AAAAATGGCAGATCCATGTCATCAGCATTTGTGCTATGGAATGAGTTTCAGAAAATTAAACCCGTTTTATTAAACTCGAT CTTTCAACGTATAGCCGATATTCCAATATTTATTATATTTCTCATTGTTATATATGTAAATTTAGGTCTGGTCGTTATTG TACCTATTACCATGTTTATCGTCTCTATTATTATTTCCCTCGTTAACCACCATTATACTAATGAGTTAATGAACAAACAA AAAGAAGGACAGAAGAACAGGAATATTTTTATCTCAGAAGTTTTCTTATCTATTAAAATGATCCATACCTTAAATAATCA AGGTTTACTTTTTGATTGGGTTAATACATCAAATGAACAGTCGTATCTTAACCTGAAGATAAGGAAATTAAATCTTATCT ATCAATCTATATTGGGGAGTATGTCATCTATTACCCAAATAACTATTATGGTAATAGCCTTTTTTATGGTAATCAAGGGT GATGTTACTACTGGCGCAATTGTTTCATCTGTCATTGTCTCTGGTCGTATTTCCGGGATTATTTCGAATTTTTCTTCTAC ATTAATCTCTATTTTATCAGCAGAAAAAACCGGTAAGGATCTGCTTTCTTTTTTTGATGAAGATCAGGCAGAAAAAACAC CGGCATTACAGTCAATATCAAAGTGCAATGGCGATATTTCTATTCGGGGTGTGAGTTATCAGTATGATGCTCAATCTCCG ATGATTATTAACCGACTGTCTATAGACATACCTGCGGGGCAACGTGTCGCGGTGGTAGGCGAATGCGGAGCAGGAAAAAG CTCATTACTGGGAATGCTATCTGGCTACCTTTCGCCAACAGACGGTGCCATTTTATATGATGGATATAACTTAGGACATT TATCGCAGAACTTTTTTTCTCAGCATTTAAGCGTGGTGACGACACATGATGTTTTATTCACCGGAACCATTGAAAGTAAT TTCGCGTTAAAACCGCAAAACGACAGGGGCCGGGTACTCAAGGCGCTTCAGCTGGCGAACTGTGGTTTTATCTTGCAACA TCCTATGGGGCTGAAGTTTCCGGTGAATTTTATGGCTAAAAACCTGTCATCCGGACAGCAGCAGCAGTTATTATTAGCAC GTAGTCTGAGTAGTGACGCCAGCGTCTTTTTATGGGATGAACCAACATCAAATCTGGATGAGAATACCGAGAAGCAAATT TTTGATAACTTAGATGAGTTTATTCATGGGAAAACGTTGATCATGGTGACGCATCGTCGATATCTGATAAAGTATTTTGA CCGGGTCCTGGTAATGAAAGGTGGAAAAATAATCCGTGATTGTTCTCCGGATAAATTATTAATGTAA Protein sequence : MDKKLEPYYLSAETALSIVSKKFNIKIDIKEDDINLRFKKYDRNNTDDSIQMKNFFLSLGLSLQDILFNNGEDLLNEPMP ILLLTPEMKWMVCVSGGQKIKLVNARGELCYVEIEDEYLKELSAFSILPLNKVVDSIRVKNIIKNSLSMNKIFYTKYFFS SLFMAIFALTIPVFSNLFYDKLVPSASVSSLFGVAIIVAVFIVFEFILRTSKDIYQSITARQDDVDIDIAFLEAVLYSKK KNGRSMSSAFVLWNEFQKIKPVLLNSIFQRIADIPIFIIFLIVIYVNLGLVVIVPITMFIVSIIISLVNHHYTNELMNKQ KEGQKNRNIFISEVFLSIKMIHTLNNQGLLFDWVNTSNEQSYLNLKIRKLNLIYQSILGSMSSITQITIMVIAFFMVIKG DVTTGAIVSSVIVSGRISGIISNFSSTLISILSAEKTGKDLLSFFDEDQAEKTPALQSISKCNGDISIRGVSYQYDAQSP MIINRLSIDIPAGQRVAVVGECGAGKSSLLGMLSGYLSPTDGAILYDGYNLGHLSQNFFSQHLSVVTTHDVLFTGTIESN FALKPQNDRGRVLKALQLANCGFILQHPMGLKFPVNFMAKNLSSGQQQQLLLARSLSSDASVFLWDEPTSNLDENTEKQI FDNLDEFIHGKTLIMVTHRRYLIKYFDRVLVMKGGKIIRDCSPDKLLM |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STM4262 | NP_463127.1 | ABC-type bacteriocin/lantibiotic exporter | Not tested | SPI-4 | Protein | 0.0 | 100 |
| spi4_R | AAC26655.1 | ltkB homolog | Virulence | SPI-4 | Protein | 0.0 | 100 |
| siiF | CAE11798.1 | putative type-I secretion protein (putative inner membrane component) | Virulence | SPI-4 | Protein | 0.0 | 100 |
| SC4141 | YP_219128.1 | bacteriocin/lantibiotic ABC transporter | Not tested | SPI-4 | Protein | 0.0 | 99 |
| STY4460 | NP_458560.1 | putative type-1 secretion protein | Not tested | SPI-4 | Protein | 0.0 | 99 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SN31241_5790 | YP_008358497.1 | Bacteriocin/lantibiotic ABC transporter | VFG0582 | Protein | 0.0 | 100 |
