Gene Information

Name : SN31241_5730 (SN31241_5730)
Accession : YP_008358491.1
Strain : Salmonella enterica USMARC-S3124.1
Genome accession: NC_021902
Putative virulence/resistance : Virulence
Product : Single-stranded DNA-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 579234 - 579887 bp
Length : 654 bp
Strand : +
Note : single-stranded DNA-binding protein PRK09010; Single-stranded DNA-binding protein of root UniRef RepID=SSB_SALTI

DNA sequence : 
ATGCAACAATATGAGGTTCGCGCGAGTGACCTGGAACCTGCATCGCAGCTATTAAAATGCTACGTGGAAATGGTACACTC
ACGCGTTTACACTATTTATGAAACGTATTCAGGAGACTCAATTATGGCCAGCAGAGGCGTAAACAAGGTGATTCTCGTTG
GTAATCTGGGCCAGGACCCGGAAGTACGCTATATGCCGAGTGGCGGCGCTGTCGCCAACTTAACGCTGGCTACTTCTGAA
TCCTGGCGCGATAAGCAGACCGGCGAAATGAAAGAGCAGACTGAATGGCACCGGGTGGTGATGTTCGGCAAACTGGCGGA
AGTGGCCGGCGAATATCTGCGTAAAGGTTCTCAGGTGTATATCGAAGGTCAATTGCGTACCCGCAAGTGGACCGATCAGA
GTGGCCAGGAACGCTATACGACTGAAATTAACGTTCCGCAGATCGGCGGCGTGATGCAGATGCTGGGTGGTCGCCAGGGC
GGCGGCGCACCGGCAGGCGGTCAGCAGCAGGGGGGTTGGGGTCAACCGCAACAACCTCAGCAGCCGCAGGGCGGCAACCA
GTTCAGCGGCGGCGCGCAGTCGCGTCCACAGCAATCCGCGCCAGCGCCGTCTAACGAACCGCCAATGGATTTTGACGACG
ACATTCCGTTCTGA

Protein sequence : 
MQQYEVRASDLEPASQLLKCYVEMVHSRVYTIYETYSGDSIMASRGVNKVILVGNLGQDPEVRYMPSGGAVANLTLATSE
SWRDKQTGEMKEQTEWHRVVMFGKLAEVAGEYLRKGSQVYIEGQLRTRKWTDQSGQERYTTEINVPQIGGVMQMLGGRQG
GGAPAGGQQQGGWGQPQQPQQPQGGNQFSGGAQSRPQQSAPAPSNEPPMDFDDDIPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssb AAC26638.1 single-strand binding protein Not tested SPI-4 Protein 4e-41 79
ssb NP_807839.1 single-stranded DNA-binding protein Not tested SPI-7 Protein 8e-41 63
ssb AAF14810.1 single strand binding protein Not tested SPI-7 Protein 5e-41 63
ssB NP_458627.1 single strand binding protein Not tested SPI-7 Protein 8e-41 63

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SN31241_5730 YP_008358491.1 Single-stranded DNA-binding protein VFG0576 Protein 4e-53 100