|
Name : SN31241_46500 (SN31241_46500) Accession : YP_008362562.1 Strain : Salmonella enterica USMARC-S3124.1 Genome accession: NC_021902 Putative virulence/resistance : Unknown Product : Capsid protein Function : - COG functional category : - COG ID : - EC number : - Position : 4719188 - 4720348 bp Length : 1161 bp Strand : - Note : Capsid proteins of root UniRef RepID=VPN_BPP2 DNA sequence : ATGCGTAAAGACACCCGTTTTAAATTCAATCAGTACCTGAGCCGTATCGCCGAACTGAACGGCATCGAGGTCAGCGACCT CAACAAAAAATTCACCGTCGAGCCGTCGGTGACGCAGACCCTGTTTGACAAAATCCAGCAATCATCCAGCTTCCTGAAGC TCATCAACATGGTGACGGTTGGCGAGCTGACCGAGGAAAAAGTCGGCATCGATGTGACCGGATCCATTGCCAGCACCGCT GATACCGACGGTGGCGTCGAGCGTAAGACCGCTGATTTCGCGAAAATGGATGCGTACCGCTATTTCTGTCATCCGGTGAA CTTCGACTATCACCTGAAGTACAACAAGCTCGACCTGTGGGCGCGTTTTCAGGATTTCCAGATTCGGATCCGTAACGCCA TCATCAAGCGTCAGGCGCTGGATTACATCACCATCGGCTTTAACGGCGTGAGCCGGGCGGCGACGTCTGACCGTAGCAAA AACCCGTTACTTCAAGATGTGGCTGTCGGCTGGTTGCAGAAATACCGCAACGACGCGCCTGAGCGTGTGATGTCCAGCAT CACCGACGCTGAAGGTACCGTGATTTCGAACACCATCAAAGTAGGTAAAGGGGGGCATTACGCCAACCTCGACGCGCTGG TCATGGATGCTTTCGAGTCGCTGGTCGCGGAAATTCACCGCGAGAACCCGGAAATGGTTGTCATCTGTGGTCGCCGTATC CTGACCGACAAATACTTCCCGATGATTAACAAGTTCCAGGCAAACAGCGAACAGCTCGCCGGTGAGCTGATTATCAGCCA GAAAACCATCGGCCAGCTTCAGGCGGTGCGCGCGCCATTCTTCCCGGCAAACAGCGTTTTCATCACCACGCTGGATAACA TTTCGATTTATCTGTACGAGGACGGTCACCGCCGCCACATCGTCGAAAATCCGAAACTCGACCAGGTGGAAAACTACGAA CAGGTCAAAGTCGATTTCGTTATCGAGGACTACGAGGCCGGTTGCCTGATTGAAAATATCGAGATCCTCGAACCGGAAGA ACCCGCCACCTCGGAACCAGTGAGCGCGGAAGTCTTCGCGGCGGCAATGGTCAAAGCGATGCAGTCTCTGACAGGCAGCG CACCGGCTGAAACCGGCACCACTGACGGCAAGGAGGCATAA Protein sequence : MRKDTRFKFNQYLSRIAELNGIEVSDLNKKFTVEPSVTQTLFDKIQQSSSFLKLINMVTVGELTEEKVGIDVTGSIASTA DTDGGVERKTADFAKMDAYRYFCHPVNFDYHLKYNKLDLWARFQDFQIRIRNAIIKRQALDYITIGFNGVSRAATSDRSK NPLLQDVAVGWLQKYRNDAPERVMSSITDAEGTVISNTIKVGKGGHYANLDALVMDAFESLVAEIHRENPEMVVICGRRI LTDKYFPMINKFQANSEQLAGELIISQKTIGQLQAVRAPFFPANSVFITTLDNISIYLYEDGHRRHIVENPKLDQVENYE QVKVDFVIEDYEAGCLIENIEILEPEEPATSEPVSAEVFAAAMVKAMQSLTGSAPAETGTTDGKEA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY4625 | NP_458707.1 | putative major capsid protein | Not tested | SPI-7 | Protein | 1e-91 | 58 |
| t4319 | NP_807914.1 | major capsid protein | Not tested | SPI-7 | Protein | 1e-91 | 58 |
| unnamed | ABR13466.1 | predicted major capsid protein | Not tested | PAGI-6 | Protein | 2e-71 | 48 |
