Gene Information

Name : SN31241_43050 (SN31241_43050)
Accession : YP_008362220.1
Strain : Salmonella enterica USMARC-S3124.1
Genome accession: NC_021902
Putative virulence/resistance : Virulence
Product : Transcriptional regulatory protein qseB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4355739 - 4356398 bp
Length : 660 bp
Strand : +
Note : DNA-binding transcriptional regulator QseB PRK10336; Transcriptional regulatory protein qseB of Bacteria UniRef RepID=QSEB_HAEIN

DNA sequence : 
ATGCGAATTTTACTGGTAGAAGATGACACACTTATTGGCGATGGCATAAAAGCGGGCCTGAGTAAAATGGGTTTCAGCGT
CGACTGGTTTACCGAGGGACGCCCGGGCAAAGAGGCGCTTTACAGCGCGCCTTATGATGCGGTTATTTTAGATTTGACGC
TGCCAGGCATGGACGGACGGGATATTTTGCGCGAATGGCGCGAAAAGGGTAAACAGGAACCGGTGCTGATCCTGACGGCG
CGCGACGCGTTAGCAGAGCGCGTCGAGGGGCTACGTCTGGGCGCCGATGACTATTTATGTAAACCTTTCGCGCTCATTGA
GGTCGCCGCCCGTCTGGAGGCGCTGGTACGCCGCGCCAGCGGTCAGGCCAGTAGCGAATTGCGCCACGGCCAGGTGACGC
TCAATCCAGGCAATCTCGTCGCGACGCTTGCCGGCGAACCGCTGGCCTTAAAACCAAAAGAGTTCGCGTTGCTGGAACTC
TTACTGCGCAACAAAGGTCGCGTGCTGCCGCGCAAGCTTATTGAAGAGAAGCTGTATAACTGGGATGACGACGTGTCCAG
CAATGCAGTGGAAGTCCATGTTCATCATTTACGCCGCAAGCTCGGCAGCGAATTTATTCGCACCGTACACGGCATCGGCT
ACACCCTGGGTGACGCATGA

Protein sequence : 
MRILLVEDDTLIGDGIKAGLSKMGFSVDWFTEGRPGKEALYSAPYDAVILDLTLPGMDGRDILREWREKGKQEPVLILTA
RDALAERVEGLRLGADDYLCKPFALIEVAARLEALVRRASGQASSELRHGQVTLNPGNLVATLAGEPLALKPKEFALLEL
LLRNKGRVLPRKLIEEKLYNWDDDVSSNAVEVHVHHLRRKLGSEFIRTVHGIGYTLGDA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 4e-34 48

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SN31241_43050 YP_008362220.1 Transcriptional regulatory protein qseB BAC0487 Protein 1e-34 46
SN31241_43050 YP_008362220.1 Transcriptional regulatory protein qseB BAC0308 Protein 2e-30 43
SN31241_43050 YP_008362220.1 Transcriptional regulatory protein qseB BAC0638 Protein 6e-26 42
SN31241_43050 YP_008362220.1 Transcriptional regulatory protein qseB NC_002516.2.879194.p Protein 2e-23 41
SN31241_43050 YP_008362220.1 Transcriptional regulatory protein qseB BAC0347 Protein 3e-28 41
SN31241_43050 YP_008362220.1 Transcriptional regulatory protein qseB BAC0111 Protein 3e-28 41
SN31241_43050 YP_008362220.1 Transcriptional regulatory protein qseB BAC0083 Protein 2e-30 41
SN31241_43050 YP_008362220.1 Transcriptional regulatory protein qseB BAC0197 Protein 5e-30 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SN31241_43050 YP_008362220.1 Transcriptional regulatory protein qseB VFG0473 Protein 7e-35 47
SN31241_43050 YP_008362220.1 Transcriptional regulatory protein qseB VFG1390 Protein 2e-26 41