|
Name : SN31241_39850 (SN31241_39850) Accession : YP_008361900.1 Strain : Salmonella enterica USMARC-S3124.1 Genome accession: NC_021902 Putative virulence/resistance : Virulence Product : Surface presentation of antigens protein spaM Function : - COG functional category : - COG ID : - EC number : - Position : 4038371 - 4038814 bp Length : 444 bp Strand : - Note : type III secretion system protein SpaM PRK15335; Surface presentation of antigens protein spaM of Salmonella UniRef RepID=SPAM_SALTY DNA sequence : ATGCATTCGCTGACCAGAATTAAAGTATTGCAGCGGCGCTGTACGGTATTTCATTCACAGTGTGAGTCGATATTACTTCG CTATCAGGATGAGGACCGCGGGCTGCAGGCCGAGGAGGAGGCGATCCTTGAACAAATAGCGGGTCTGAAATTGTTATTAG ATACGCTGCGTGCAGAAAACAGACAGCTCAGTCGTGAGGAAATTTATACGTTATTACGTAAGCAGTCTATTGTTCGCCGG CAGATAAAAGATTTAGAACTCCAGATTATACAAATTCAGGAAAAACGGAGAGAGCTGGAAAAGAAAAGGGAAGAGTTTCA GAAAAAAAGTAAATATTGGTTGCGCAAAGAAGGGAACTATCAACGCTGGATAATCCGTCAGAAAAGATTCTATATCCAGC GAGAGATACAGCAGGAAGAGGCCGAGTCAGAGGAGATAATTTAA Protein sequence : MHSLTRIKVLQRRCTVFHSQCESILLRYQDEDRGLQAEEEAILEQIAGLKLLLDTLRAENRQLSREEIYTLLRKQSIVRR QIKDLELQIIQIQEKRRELEKKREEFQKKSKYWLRKEGNYQRWIIRQKRFYIQREIQQEEAESEEII |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| spaM | NP_457287.1 | secretory protein (associated with virulence) | Virulence | SPI-1 | Protein | 1e-35 | 99 |
| spaM | NP_806496.1 | virulence-associated secretory protein | Virulence | SPI-1 | Protein | 1e-35 | 99 |
| invI | YP_217812.1 | surface presentation of antigens; secretory proteins | Virulence | SPI-1 | Protein | 1e-36 | 99 |
| invI | NP_461814.1 | needle complex assembly protein | Virulence | SPI-1 | Protein | 1e-36 | 99 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SN31241_39850 | YP_008361900.1 | Surface presentation of antigens protein spaM | VFG0554 | Protein | 3e-37 | 99 |
