Gene Information

Name : SN31241_39700 (SN31241_39700)
Accession : YP_008361885.1
Strain : Salmonella enterica USMARC-S3124.1
Genome accession: NC_021902
Putative virulence/resistance : Virulence
Product : Secreted effector protein sptP
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4024186 - 4025754 bp
Length : 1569 bp
Strand : -
Note : pathogenicity island 1 effector protein StpP PRK15375; Secreted effector protein sptP of Salmonella enterica UniRef RepID=SPTP_SALPA

DNA sequence :
GTGTCGAATGATGCCCGACTTTATATTGCTAAGGAAAATACTGATAAGGCATATGTTGCGCCTGAAAAATTTTCGTCAAA
AGTATTAACCTGGCTTGGAAAAATGCCGTTATTTAAAAACACTGAAGTGGTGCAAAAACATACGGAAAATATTAGAGTAC
AGGACCAAAAGATTTTACAGACATTTCTCCATGCACTAACGGAAAAATATGGGGAAACAGCGGTTAATGACGCACTGTTA
ATGTCCCGTATAAATATGAACAAACCCCTTACCCAACGTTTAGCAGTGCAGATCACGGAGTGTGTAAAAGCTGCTGACGA
AGGGTTTATAAACCTTATTAAGAGCAAGGATAATGTTGGTGTCAGGAATGCCGCTTTAGTCATAAAAGGCGGCGATACAA
AAGTGGCAGAAAAAAATAACGATGTTGGAGCAGAAAGTAAGCAACCTTTACTCGATATCGCGCTAAAGGGACTTAAAAGA
ACATTACCGCAACTGGAACAAATGGATGGAAATAGCCTGCGAGAAAACTTCCAGGAGATGGCTTCAGGTAACGGCCCGCT
GCGTTCATTAATGACGAATTTACAGAATTTAAATAAAATTCCAGAGGCTAAACAACTTAATGATTATGTTACAACGTTAA
CAAATATTCAGGTCGGTGTAGCCCGGTTCTCACAATGGGGAACCTGTGGAGGAGAGGTTGAGAGGTGGGTTGATAAAGCC
TCTACTCATGAATTAACCCAGGCTGTAAAAAAAATTCACGTTATTGCTAAAGAACTGAAAAATGTTACAGCTGAACTTGA
GAAAATAGAAGCCGGCGCGCCAATGCCACAGACGATGAGCGGACCGACACTGGGCCTGGCACGATTTGCGGTCAGCAGCA
TTCCAATTAATCAGCAAACCCAGGTGAAACTGAGCGATGGAATGCCTGTGCCAGTGAATACGTTAACTTTTGACGGTAAG
CCTGTGGCATTAGCCGGTTCGTACCCAAAAAATACGCCGGATGCGCTGGAAGCGCATATGAAAATGCTTCTTGAAAAAGA
ATGCTCGTGCCTGGTGGTGTTAACGTCGGAAGATCAGATGCAGGCAAAACAATTACCACCCTATTTCAGAGGGAGCTACA
CCTTTGGCGAGGTGCATACCAACAGCCAAAAAGTGAGCTCAGCCAGTCAGGGAGAAGCGATAGACCAATACAATATGCAA
CTGTCCTGCGGGGAAAAGCGGTATACAATCCCGGTATTGCATGTGAAAAATTGGCCAGATCACCAGCCGTTACCGTCTAC
GGATCAGTTAGAATACCTGGCGGATAGGGTGAAAAATAGTAACCAAAATGGCGCGCCGGGGCGTAGTTCATCAGATAAGC
ATTTACCGATGATTCATTGTCTGGGCGGAGTGGGGAGAACCGGAACGATGGCGGCGGCCCTTGTACTTAAGGATAATCCT
CATAGTAATCTGGAGCAGGTACGTGCAGATTTCCGGGATTCACGGAACAATAGAATGCTGGAAGACGCCTCACAGTTTGT
ACAACTAAAAGCAATGCAAGCCCAGTTGCTTATGACGACGGCACGCTGA

Protein sequence :
MSNDARLYIAKENTDKAYVAPEKFSSKVLTWLGKMPLFKNTEVVQKHTENIRVQDQKILQTFLHALTEKYGETAVNDALL
MSRINMNKPLTQRLAVQITECVKAADEGFINLIKSKDNVGVRNAALVIKGGDTKVAEKNNDVGAESKQPLLDIALKGLKR
TLPQLEQMDGNSLRENFQEMASGNGPLRSLMTNLQNLNKIPEAKQLNDYVTTLTNIQVGVARFSQWGTCGGEVERWVDKA
STHELTQAVKKIHVIAKELKNVTAELEKIEAGAPMPQTMSGPTLGLARFAVSSIPINQQTQVKLSDGMPVPVNTLTFDGK
PVALAGSYPKNTPDALEAHMKMLLEKECSCLVVLTSEDQMQAKQLPPYFRGSYTFGEVHTNSQKVSSASQGEAIDQYNMQ
LSCGEKRYTIPVLHVKNWPDHQPLPSTDQLEYLADRVKNSNQNGAPGRSSSDKHLPMIHCLGGVGRTGTMAAALVLKDNP
HSNLEQVRADFRDSRNNRMLEDASQFVQLKAMQAQLLMTTAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sptP YP_217797.1 protein tyrosine phosphate Not tested SPI-1 Protein 0.0 99
sptP NP_461799.1 protein tyrosine phosphatase/GTPase activating protein Virulence SPI-1 Protein 0.0 99
stpA NP_457272.1 tyrosine phosphatase (associated with virulence) Virulence SPI-1 Protein 0.0 95
stpA NP_806481.1 tyrosine phosphatase Virulence SPI-1 Protein 0.0 95

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SN31241_39700 YP_008361885.1 Secreted effector protein sptP VFG0540 Protein 0.0 99