Gene Information

Name : SN31241_39670 (SN31241_39670)
Accession : YP_008361882.1
Strain : Salmonella enterica USMARC-S3124.1
Genome accession: NC_021902
Putative virulence/resistance : Virulence
Product : Transcriptional regulator hilD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4019951 - 4020880 bp
Length : 930 bp
Strand : +
Note : transcriptional regulator HilD PRK15185; Transcriptional regulator hilD of Salmonella UniRef RepID=HILD_SALTS

DNA sequence :
ATGGAAAATGTAACCTTTGTAAGTAATAGTCATCAGCGTCCTGCCGCAGATAACTTACAGAAATTAAAATCACTTTTGAC
AAATACCCAGCAGCAAATTAAAAGTCAGACTCAGCAGGTTACCATCAAAAATCTTTATGTAAGCAGTTTCACTTTAGTTT
GCTTTCGGAGCGGTAAACTGACGATTAGCAATAATCACGATACGATTTACTGTGACGAACCTGGGATGTTGGTGCTCAAA
AAAGAGCAGGTAGTTAACGTGACGCTTGAAGAGGTCAATGGCCACATGGATTTCGATATACTCGAGATACCGACGCAACG
ACTTGGCGCTCTCTATGCACTTATCCCAAACGAGCAGCAAACCAAAATGGCGGTACCCACAGAGAAAGCGCAGAAAATCT
TCTATACGCCTGACTTTCCTGCCAGAAGAGAGGTATTTGAACATCTGAAAACGGCGTTCTCCTGTACGAAGGATACAAGC
AAAGGTTGCAGTAACTGTAACAACAAAAGTTGTATTGAAAATGAAGAGTTAATTCCTTATTTTCTGCTGTTCCTGCTTAC
TGCTTTTCTCCGACTCCCGGAGAGTTATGAGATCATCCTTAGCTCGGCTCAGATAACGTTAAAGGAGCGCGTTTACAACA
TTATATCTTCGTCACCCAGTAGACAGTGGAAGCTTACGGATGTTGCCGATCATATATTTATGAGTACGTCAACGCTCAAA
CGGAAACTTGCAGAAGAAGGTACCAGCTTTAGCGACATCTACTTATCGGCAAGAATGAATCAGGCAGCAAAACTTTTACG
CATAGGCAACCATAATGTTAATGCTGTAGCATTAAAATGTGGTTATGATAGCACGTCCTACTTCATTCAATGTTTCAAAA
AATATTTTAAAACTACGCCATCGACATTCATAAAAATGGCGAACCATTAA

Protein sequence :
MENVTFVSNSHQRPAADNLQKLKSLLTNTQQQIKSQTQQVTIKNLYVSSFTLVCFRSGKLTISNNHDTIYCDEPGMLVLK
KEQVVNVTLEEVNGHMDFDILEIPTQRLGALYALIPNEQQTKMAVPTEKAQKIFYTPDFPARREVFEHLKTAFSCTKDTS
KGCSNCNNKSCIENEELIPYFLLFLLTAFLRLPESYEIILSSAQITLKERVYNIISSSPSRQWKLTDVADHIFMSTSTLK
RKLAEEGTSFSDIYLSARMNQAAKLLRIGNHNVNAVALKCGYDSTSYFIQCFKKYFKTTPSTFIKMANH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hilD YP_217794.1 regulatory protein Virulence SPI-1 Protein 1e-127 100
STY2996 NP_457269.1 AraC-family transcriptional regulator Not tested SPI-1 Protein 3e-127 99
t2777 NP_806478.1 AraC family transcriptional regulator Not tested SPI-1 Protein 3e-127 99
hilD NP_461796.1 invasion protein regulatory protein Virulence SPI-1 Protein 2e-128 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SN31241_39670 YP_008361882.1 Transcriptional regulator hilD VFG0537 Protein 8e-129 99