|
Name : SN31241_39660 (SN31241_39660) Accession : YP_008361881.1 Strain : Salmonella enterica USMARC-S3124.1 Genome accession: NC_021902 Putative virulence/resistance : Virulence Product : Protein prgH Function : - COG functional category : - COG ID : - EC number : - Position : 4018457 - 4019521 bp Length : 1065 bp Strand : - Note : type III secretion system needle complex protein PrgH PRK15327; Protein prgH of Salmonella UniRef RepID=PRGH_SALTY DNA sequence : GTGGTAGGTCAGAGTGATGCGCTCACTGCTTCAGGCCAACTCCCTGATATACCTGCCGATAGCTTTTTTATCCCGCTGGA CCATGGCGGAGTAAATTTTGAAATCCAGGTGGATACGGATACGACCGAAATTATACTCCATGAGCTGAAAGAAGGAAATT CTGAATCTCGTTCGGTGCAATTAAATACGCCAATACAGGTCGGTGAATTGCTTATCCTGATTCGCCCGGAAAGCGAGCCG TGGGTGCCCGAGCAGCCTGAGAAGTTAGAAACGTCTGCAAAAAAGAACGAGCCGCGTTTTAAAAACGGAATTGTAGCAGC ACTGGCCGGGTTTTTTATATTGGGAATTGGGACGGTGGGGACGTTATGGATACTTAACTCGCCGCAGCGGCAGGCCGCAG AGCTCGATTCGTTATTGGGGCAGGAGAAGGAGCGCTTTCAGGTGTTGCCAGGACGGGACAAAATGCTCTATGTCGCTGCG CAAAATGAAAGAGATACGCTGTGGGCTCGTCAGGTTTTAGCGAGGGGCGATTATGATAAAAATGCGCGAGTGATTAACGA AAACGAAGAAAATAAGCGTATCTCTACCTGGCTGGATACCTATTATCCGCAGCTGGCTTATTATCGGCTTCATTTCGATG AGCCGCGTAAACCCGTTTTCTGGCTAAGCCGCCAGCGAAACACGATGAGCAAGAAAGAGCTCGAGGTGTTAAGTCAAAAG CTGAGAGCGCTAATGCCTTACGCGGATTCGGTTAACATCACGTTGATGGACGATGTTACCGCAGCAGGCCAGGCGGAAGC GGGGCTAAAACAGCAGGCGTTACCTTATTCCCGCAGGAATCATAAGGGGGGCGTAACGTTTGTTATTCAGGGGGCGCTCG ATGATGTAGAAATACTCAGAGCCCGTCAATTTGTCGATAGCTATTACCGCACATGGGGAGGACGCTATGTGCAGTTTGCG ATCGAATTAAAAGATGACTGGCTCAAGGGGCGCTCATTTCAGTACGGGGCGGAAGGTTATATCAAAATGAGCCCAGGCCA TTGGTATTTCCCAAGCCCACTTTAA Protein sequence : MVGQSDALTASGQLPDIPADSFFIPLDHGGVNFEIQVDTDTTEIILHELKEGNSESRSVQLNTPIQVGELLILIRPESEP WVPEQPEKLETSAKKNEPRFKNGIVAALAGFFILGIGTVGTLWILNSPQRQAAELDSLLGQEKERFQVLPGRDKMLYVAA QNERDTLWARQVLARGDYDKNARVINENEENKRISTWLDTYYPQLAYYRLHFDEPRKPVFWLSRQRNTMSKKELEVLSQK LRALMPYADSVNITLMDDVTAAGQAEAGLKQQALPYSRRNHKGGVTFVIQGALDDVEILRARQFVDSYYRTWGGRYVQFA IELKDDWLKGRSFQYGAEGYIKMSPGHWYFPSPL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| prgH | NP_461795.1 | needle complex inner membrane protein | Virulence | SPI-1 | Protein | 9e-164 | 99 |
| prgH | NP_457268.1 | pathogenicity 1 island effector protein | Virulence | SPI-1 | Protein | 3e-164 | 99 |
| prgH | NP_806477.1 | pathogenicity island 1 effector protein | Virulence | SPI-1 | Protein | 3e-164 | 99 |
| prgH | YP_217793.1 | cell invasion protein | Virulence | SPI-1 | Protein | 3e-164 | 99 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SN31241_39660 | YP_008361881.1 | Protein prgH | VFG0536 | Protein | 4e-164 | 99 |
