Gene Information

Name : SN31241_39580 (SN31241_39580)
Accession : YP_008361873.1
Strain : Salmonella enterica USMARC-S3124.1
Genome accession: NC_021902
Putative virulence/resistance : Virulence
Product : AraC-family transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4013083 - 4013703 bp
Length : 621 bp
Strand : -
Note : transcriptional activator SprB PRK15320; Possible AraC-family transcriptional regulator of Salmonella UniRef RepID=B5BES4_SALPK

DNA sequence : 
ATGCCGGATGCCGGGCTGATTTTAGCTTTGAACCCGCATGAGCATGTTTATCTTTTTCATGCGTTGCTGACGCGGTTGCA
GAACCGTAAAGTTTTGGTAGTGGCAGATCGCTTGTATTATATCGATCGCTGTGTGCTGCAATATTTTGGCGTTATGGATT
ATGTTTTAAAAGACGAACTATCCTGCGCTATCCGCTCGGATCGAGAGAAGCTCCGTCTTCCGGAAGCCTGGCTGCGTTTC
TGCCACAGGCCACAAAAGAAAACCGTGGCTGCTACGTATGCTTTTAATGCCGGCGAGACGCCGGAAGAGGTATTGTTTAA
TATCAATCAATACGCCTGGTGGAATCTACCTCCCGGTGTCACGCAGGCGAAATATGCGCTGCTGATATTATTATCCTCCG
GACATCCGGCAATTGAACTGGCGAAAAAATTTGGTCTGGGAACAAAAACCGTCAGTATTTATCGTAAGAAGGTTATGTAT
CGTTTGGGGATGGACTCTTCACCGCTATCGCTGTTCCGGGGACTGAAACTAGACGCGCATTTACAGCGCACTGCTTTTGC
ACATAACCCTGCTGTACCTGACGATAATTGCGCGTTACCGATTGCGGTAGGAATGAATTAA

Protein sequence : 
MPDAGLILALNPHEHVYLFHALLTRLQNRKVLVVADRLYYIDRCVLQYFGVMDYVLKDELSCAIRSDREKLRLPEAWLRF
CHRPQKKTVAATYAFNAGETPEEVLFNINQYAWWNLPPGVTQAKYALLILLSSGHPAIELAKKFGLGTKTVSIYRKKVMY
RLGMDSSPLSLFRGLKLDAHLQRTAFAHNPAVPDDNCALPIAVGMN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sprB NP_806469.1 AraC family transcriptional regulator Virulence SPI-1 Protein 2e-94 99
sprB YP_217785.1 transcriptional regulator Virulence SPI-1 Protein 4e-95 99
sprB NP_461787.1 transcriptional regulator Virulence SPI-1 Protein 4e-95 99
sprB AAD37785.1 transcriptional regulator SprB Virulence SPI-1 Protein 3e-95 99
sprB NP_457260.1 possible AraC-family transcriptional regulator Virulence SPI-1 Protein 2e-94 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SN31241_39580 YP_008361873.1 AraC-family transcriptional regulator VFG0530 Protein 1e-95 99