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Name : SN31241_39560 (SN31241_39560) Accession : YP_008361871.1 Strain : Salmonella enterica USMARC-S3124.1 Genome accession: NC_021902 Putative virulence/resistance : Virulence Product : ABC transport system, inner membrane component SitD Function : - COG functional category : - COG ID : - EC number : - Position : 4011066 - 4011914 bp Length : 849 bp Strand : + Note : ABC-type Mn2+/Zn2+ transport systems, permease components COG1108; ABC transport system, inner membrane component SitD of Proteobacteria UniRef RepID=B7JCB2_ECOLX DNA sequence : ATGTTCTTAACAACGTTACTGGAACCCTTTCAGTTTGATTTTATGGTGAACGCCCTTATGGTTTCGGTCATTGTAGCGAT TCCCTGCGCCTTACTGTCCGTGTTTTTAGTGTTAAAAGGCTGGGCGTTAATGGGCGACGCAATGAGTCATGCGGTATTCC CCGGGGTCGTGCTGGCATATATTGTGGGGATCCCCCTGGCGATTGGCGCTTTCATTGCCGGATTATTTTGCGCTATCGCC ACCGGCTATCTGGACGATAACAGCCGCATCAAACGTGATACGGTGATGGGCATCGTCTTTTCCGGGATGTTTGGCGCAGG TCTGGTGCTCTATGTTTCTATTCAATCGGAAGTGCATCTGGATCACATCCTGTTTGGGGATATGCTGGGCGTATCGCTGG GGGATATCGTACAAACGTCAGTTATTGCACTGGGTATTGCGTTAATCATTGGGCTGAAATGGAAAGATCTCCTGCTACAC GCTTTTGACCCGCACCAGGCGAAAGCCAGCGGGCTGAATACCACGCTACTGCATTATGGCCTGCTATGTATGATTGCGCT GACTATCGTCGCCACGCTGAAATCGGTGGGCATTATTCTGTCGATCTCACTGCTTATCGCCCCCGGCGCAATTGCCATTT TGCTGACGCGACGCTTTGCGCGCGCGCTGGGATTAGCGGTGAGTCTGTCAGTTATTACCGCTTTTGCGGGCGTCTATCTG TCTTTTTATCTTGATAGCGCGCCAGCGCCGACCATCGTGGTATTATTTGCCATCGTATTTATTGCGGTATTTATTTACGC AACATGGCGCGACAGGCGTAATGAAATAGTACCAGAGGCGCAAGGTTAA Protein sequence : MFLTTLLEPFQFDFMVNALMVSVIVAIPCALLSVFLVLKGWALMGDAMSHAVFPGVVLAYIVGIPLAIGAFIAGLFCAIA TGYLDDNSRIKRDTVMGIVFSGMFGAGLVLYVSIQSEVHLDHILFGDMLGVSLGDIVQTSVIALGIALIIGLKWKDLLLH AFDPHQAKASGLNTTLLHYGLLCMIALTIVATLKSVGIILSISLLIAPGAIAILLTRRFARALGLAVSLSVITAFAGVYL SFYLDSAPAPTIVVLFAIVFIAVFIYATWRDRRNEIVPEAQG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| sitD | YP_217784.1 | iron transporter: fur regulated | Virulence | SPI-1 | Protein | 6e-103 | 100 |
| sitD | NP_461785.1 | permease | Virulence | SPI-1 | Protein | 5e-103 | 99 |
| sitD | AAD41068.1 | SitD | Virulence | centisome 63 pathogenicity island | Protein | 4e-103 | 99 |
| sitD | NP_457258.1 | Iron transport protein, inner membrane component | Virulence | SPI-1 | Protein | 8e-103 | 99 |
| sitD | NP_806467.1 | iron transporter inner membrane protein | Virulence | SPI-1 | Protein | 8e-103 | 99 |
| sitC | AAD41067.1 | SitC | Virulence | centisome 63 pathogenicity island | Protein | 7e-34 | 41 |
| sitC | NP_457257.1 | Iron transport protein, inner membrane component | Virulence | SPI-1 | Protein | 1e-33 | 41 |
| sitC | NP_806466.1 | iron transporter inner membrane protein | Virulence | SPI-1 | Protein | 1e-33 | 41 |
| sitC | YP_217783.1 | iron transporter: fur regulated | Virulence | SPI-1 | Protein | 1e-33 | 41 |
| sitC | NP_461784.1 | permease | Virulence | SPI-1 | Protein | 1e-33 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SN31241_39560 | YP_008361871.1 | ABC transport system, inner membrane component SitD | BAC0352 | Protein | 2e-103 | 99 |
| SN31241_39560 | YP_008361871.1 | ABC transport system, inner membrane component SitD | BAC0442 | Protein | 5e-55 | 54 |
| SN31241_39560 | YP_008361871.1 | ABC transport system, inner membrane component SitD | BAC0441 | Protein | 8e-34 | 43 |
| SN31241_39560 | YP_008361871.1 | ABC transport system, inner membrane component SitD | BAC0351 | Protein | 5e-34 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SN31241_39560 | YP_008361871.1 | ABC transport system, inner membrane component SitD | VFG0528 | Protein | 2e-103 | 99 |
| SN31241_39560 | YP_008361871.1 | ABC transport system, inner membrane component SitD | VFG0527 | Protein | 4e-34 | 41 |
