Gene Information

Name : SN31241_24790 (SN31241_24790)
Accession : YP_008360395.1
Strain : Salmonella enterica USMARC-S3124.1
Genome accession: NC_021902
Putative virulence/resistance : Virulence
Product : Secretion system apparatus lipoprotein SsaJ
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2514609 - 2515298 bp
Length : 690 bp
Strand : +
Note : type III secretion system lipoprotein SsaJ PRK15348; Secretion system apparatus lipoprotein SsaJ of Enterobacteriaceae UniRef RepID=SSAJ_SALT1

DNA sequence :
GTGGATCTTTATCGCTCATTGCCAGAAGATGAGGCGAATCAAATGCTGGCATTACTTATGCAGCATCATATTGATGCGGA
AAAAAAACAGGAAGAGGATGGTGTAACCTTACGTGTCGAGCAGTCGCAGTTTATTAATGCGGTTGAGCTACTTAGACTTA
ACGGTTATCCGCATAGGCAGTTTACAACGGCGGATAAGATGTTTCCGGCTAATCAGTTAGTGGTATCACCCCAGGAAGAA
CAGCAGAAGATTAATTTTTTAAAAGAACAAAGAATTGAAGGAATGCTGAGTCAGATGGAGGGCGTGATTAATGCAAAAGT
GACCATTGCGCTACCGACTTATGATGAGGGAAGTAACGCTTCTCCGAGCTCAGTTGCCGTATTTATAAAATATTCACCTC
AGGTCAATATGGAGGCCTTTCGGGTAAAAATTAAAGATTTAATAGAGATGTCAATCCCTGGGTTGCAATACAGTAAGATT
AGTATCTTGATGCAGCCTGCTGAATTCAGAATGGTACCTGATGTACCCGCGAGACAAACATTCTGGATTATGGACGTGAT
CAACGCCAATAAAGGGAAGGTGGAGAAGTGGTTGATGAAATACCCTTATCAGTTGATGTTATCGTTGACAGGACTGTTAT
TAGGAGTGGGCATCCTGATCGGCTATTTTTGCCTGAGACGCCGTTTTTGA

Protein sequence :
MDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVEQSQFINAVELLRLNGYPHRQFTTADKMFPANQLVVSPQEE
QQKINFLKEQRIEGMLSQMEGVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKI
SILMQPAEFRMVPDVPARQTFWIMDVINANKGKVEKWLMKYPYQLMLSLTGLLLGVGILIGYFCLRRRF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssaJ NP_460374.1 needle complex inner membrane lipoprotein Virulence SPI-2 Protein 5e-94 99
ssaJ NP_456119.1 putative pathogenicity island lipoprotein Virulence SPI-2 Protein 7e-95 99
ssaJ NP_805080.1 pathogenicity island lipoprotein Virulence SPI-2 Protein 7e-95 99
ssaJ YP_216417.1 secretion system apparatus protein SsaJ Virulence SPI-2 Protein 2e-95 99
ssaJ CAA70532.1 secretion system apparatus Virulence SPI-2 Protein 3e-94 99
ssaJ CAA12196.1 SsaJ Virulence SPI-2 Protein 1e-74 99
YPO0263 YP_002345344.1 type III secretion system apparatus lipoprotein Virulence Not named Protein 8e-47 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SN31241_24790 YP_008360395.1 Secretion system apparatus lipoprotein SsaJ VFG0510 Protein 2e-94 99