Gene Information

Name : SN31241_24770 (SN31241_24770)
Accession : YP_008360393.1
Strain : Salmonella enterica USMARC-S3124.1
Genome accession: NC_021902
Putative virulence/resistance : Virulence
Product : Type III secretion system protein, SsaH
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2514050 - 2514292 bp
Length : 243 bp
Strand : +
Note : type III secretion system protein SsaH PRK15356; Type III secretion system protein, SsaH family of Enterobacteriaceae UniRef RepID=B4T4U7_SALNS

DNA sequence : 
TTGCTGCTGGAAATCATGTTTGCGGGCGTTAACCATAGCCTGATTTCCCAGGTACATGCGATGTTACCAGCGCTAACGGT
TATTGTTCCGGATAAAAAATTACAGTTGGTATGTCTGGCATTATTGTTGGCGGGTTTAAATGAGCCGCTAAAAGCCGCGA
AAATTTTATCGGATATAGATTTGCCAGAGGCTATGGCGCTGCGTCTGTTATTTCCTGCACCAAATGAGGGGTTTGAAAAT
TGA

Protein sequence : 
MLLEIMFAGVNHSLISQVHAMLPALTVIVPDKKLQLVCLALLLAGLNEPLKAAKILSDIDLPEAMALRLLFPAPNEGFEN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssaH CAA12194.1 SsaH Virulence SPI-2 Protein 9e-17 100
ssaH AAX49621.1 SsaH Virulence SPI-2 Protein 9e-17 100
ssaH NP_460372.1 type III secretion system apparatus protein Virulence SPI-2 Protein 1e-16 100
ssaI AAC28875.1 SsaI Virulence SPI-2 Protein 5e-16 99
ssaH NP_456121.1 putative pathogenicity island protein Virulence SPI-2 Protein 2e-16 99
ssaH NP_805078.1 pathogenicity island protein Virulence SPI-2 Protein 2e-16 99
ssaH YP_216415.1 secretion system apparatus protein SsaH Virulence SPI-2 Protein 1e-18 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SN31241_24770 YP_008360393.1 Type III secretion system protein, SsaH VFG0508 Protein 4e-17 100