Gene Information

Name : SN31241_24680 (SN31241_24680)
Accession : YP_008360384.1
Strain : Salmonella enterica USMARC-S3124.1
Genome accession: NC_021902
Putative virulence/resistance : Virulence
Product : Secreted effector protein SseB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2508248 - 2508796 bp
Length : 549 bp
Strand : +
Note : pathogenicity island 2 effector protein SseB PRK15364; Secreted effector protein SseB of Enterobacteriaceae UniRef RepID=SSEB_SALTY

DNA sequence : 
GTGTTTAAAAATAGCTTCGGCGTCAGCAACGCTGATACCGGGAGCCAGGATGACTTATCCCAGCAAAATCCGTTTGCCGA
AGGGTATGGTGTTTTGCTTATTCTCCTTATGGTTATTCAGGCTATCGCAAATAATAAATTTATTGAAGTCCAGAAGAACG
CTGAGCGTGCCAGAAATACCCAGGAAAAGTCAAATGAGATGGATGAGGTGATTGCTAAAGCAGCCAAAGGGGATGCTAAA
ACCAAAGAGGAGGTGCCTGAGGATGTAATTAAATACATGCGTGATAATGGTATTCTCATCGATGGTATGACCATTGATGA
TTATATGGCTAAATATGGCGATCATGGGAAGCTGGATAAAGGTGGCCTACAGGCGATCAAAGCGGCTTTGGATAATGACG
CCAACCGGAATACCGATCTTATGAGTCAGGGGCAGATAACAATTCAAAAAATGTCTCAGGAGCTTAACGCTGTCCTTACC
CAACTGACAGGGCTTATCAGTAAGTGGGGGGAAATTTCCAGTATGATAGCGCAGAAAACGTACTCATGA

Protein sequence : 
MFKNSFGVSNADTGSQDDLSQQNPFAEGYGVLLILLMVIQAIANNKFIEVQKNAERARNTQEKSNEMDEVIAKAAKGDAK
TKEEVPEDVIKYMRDNGILIDGMTIDDYMAKYGDHGKLDKGGLQAIKAALDNDANRNTDLMSQGQITIQKMSQELNAVLT
QLTGLISKWGEISSMIAQKTYS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sseB NP_456130.1 putative pathogenicity island effector effector protein Virulence SPI-2 Protein 1e-79 99
sseB NP_805069.1 pathogenicity island effector protein Virulence SPI-2 Protein 1e-79 99
sseB NP_460363.1 translocation machinery component Virulence SPI-2 Protein 1e-79 99
sseB AAC28879.1 putative secreted protein Virulence SPI-2 Protein 7e-80 99
sseB CAA12185.1 SseB Virulence SPI-2 Protein 7e-80 99
sseB YP_216406.1 secretion system effector protein SseB Virulence SPI-2 Protein 4e-79 97

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SN31241_24680 YP_008360384.1 Secreted effector protein SseB VFG0499 Protein 3e-80 99