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Name : SN31241_24660 (SN31241_24660) Accession : YP_008360382.1 Strain : Salmonella enterica USMARC-S3124.1 Genome accession: NC_021902 Putative virulence/resistance : Virulence Product : Type III secretion apparatus protein, YscD/HrpQ Function : - COG functional category : - COG ID : - EC number : - Position : 2506161 - 2507360 bp Length : 1200 bp Strand : + Note : type III secretion system protein SsaD PRK15367; Type III secretion apparatus protein, YscD/HrpQ family of Salmonella enterica UniRef RepID=B4T4T6_SALNS DNA sequence : ATGGTTAATCCAAAGAGCTCCTGGAAAATACGTTTTTTAGGTCACGTTTTACAAGGCCGGGAAGTATGGCTGAATGAAGG TAACCTGTCACTGGGGGAGAAAGGATGCGATATTTGTATTCCGCTTACTATAAATGAAAAAATTATTCTGAGAGAACAGG CAGATAATTTATTTGTTGATGCCGGGAAAGCCAGAGTTAGAGTTAATGGCCGCAGATTTAATCCAAATAAGCCGCTACCA TCCAGTGGGGTTTTGCAGGTTGCGGGAGTGGCTATCGCGTTTGGTAAACAGGATTGTGAACTTGCTGATTATCAAATACC CGTTTCCAGATCAGGCTACTGGTGGTTGGCTGGCGTATTCTTGATTTTTATCGGTGGAATGGGGGTCCTGTTAAGTATTA GTGGTCAGCCTGAAACGGTAAATGACTTACCTTTGCGGGTTAAGTTTTTATTAGACAAAAGCAATATTCATTATGTGCGG GCGCAATGGAAAGAAGATGGCAGCCTGCAGTTGTCCGGTTATTGCTCGTCAAGCGAACAGATGCAAAAGGTGAGAGCGAC TCTCGAATCATGGGGGGTCATGTATCGGGATGGTGTAATCTGTGATGACTTATTGGTACGAGAAGTGCAGGATGTTTTGA TAAAAATGGGTTACCCGCATGCTGAAGTATCCAGCGAAGGGCCGGGGAGCGTGTTAATTCATGATGATATACAAATGGAT CAGCAATGGCGTAAGGTTCAACCATTACTTGCAGATATTCCCGGGTTATTGCACTGGCAGATTAGTCACTCTCATCAGTC TCAGGGGGATGATATTATTTCTGCGATAATAGAGAACGGTTTAGTGGGGCTTGTCAATGTTACGCCAATGCGGCGCTCTT TTGTTATCAGTGGTGTACTGGATGAATCTCATCAACGCATTTTGCAAGAAACGTTAGCAGCATTAAAGAAAAAGGATCCC GCTCTTTCTTTAATTTATCAGGATATTGCGCCTTCCCATGATGAAAGCAAGTATCTGCCTGCGCCAGTGGCTGGCTTTGT ACAGAGTCGCCATGGTAATTACTTATTACTGACGAATAAAGAGCGTTTACGTGTAGGGGCATTGTTACCCAATGGGGGAG AAATTGTCCATCTGAGTGCCGATGTGGTAACGATTAAACATTATGATACTTTGATTAACTATCCATTAGATTTTAAGTGA Protein sequence : MVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPLTINEKIILREQADNLFVDAGKARVRVNGRRFNPNKPLP SSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWLAGVFLIFIGGMGVLLSISGQPETVNDLPLRVKFLLDKSNIHYVR AQWKEDGSLQLSGYCSSSEQMQKVRATLESWGVMYRDGVICDDLLVREVQDVLIKMGYPHAEVSSEGPGSVLIHDDIQMD QQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIENGLVGLVNVTPMRRSFVISGVLDESHQRILQETLAALKKKDP ALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLLLTNKERLRVGALLPNGGEIVHLSADVVTIKHYDTLINYPLDFK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ssaD | YP_216403.1 | secretion system apparatus protein SsaD | Virulence | SPI-2 | Protein | 0.0 | 99 |
| ssaD | NP_456133.1 | putative pathogenicity island protein | Virulence | SPI-2 | Protein | 0.0 | 99 |
| ssaD | NP_805066.1 | pathogenicity island protein | Virulence | SPI-2 | Protein | 0.0 | 99 |
| ssaD | NP_460360.1 | virulence protein | Virulence | SPI-2 | Protein | 0.0 | 99 |
| spiB | AAC44302.1 | SpiB | Virulence | SPI-2 | Protein | 3e-149 | 99 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SN31241_24660 | YP_008360382.1 | Type III secretion apparatus protein, YscD/HrpQ | VFG0496 | Protein | 0.0 | 99 |
