Gene Information

Name : SN31241_2450 (SN31241_2450)
Accession : YP_008358164.1
Strain : Salmonella enterica USMARC-S3124.1
Genome accession: NC_021902
Putative virulence/resistance : Virulence
Product : Chaperone protein lpfB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 248732 - 249394 bp
Length : 663 bp
Strand : +
Note : long polar fimbrial chaperone LpfB PRK15208; Chaperone protein lpfB of Enterobacteriaceae UniRef RepID=LPFB_SALTY

DNA sequence : 
GTGCTGGCGTTGATTGCTCAAAACAGTTTTGCCGGAGGCGTGGCATTAAGCAGCACGCGTGTTATTTATGACGGTAGTAG
AAAGGAAGCTTCTCTTACGGTAAATAATAAAAGCACCACGGATGAATTTCTCATTCAGTCATGGATTGATGATGCTAACG
GTAATAAAAAGACGCCCTTTATCATCACTCCACCGTTATTTAAATTAAGCCCGACTAAAAATAACGTTTTACGTATTGTT
AATACGACGAACACGTTACCGCAGGATCGCGAGTCCGTTTATTGGATTAACGTAAAAGCTATTCCTGCCAAAAGTGAAGA
CGCGGAAGCTAAAAACGTACTGCAGATCGCCGTACGTACCCGCTTAAAACTGTTCTATCGCCCGGCGGGCCTGAAAGGCA
ATAGCATGGACGGCTGGAACAAACTGCAGTTCACCAGCGCAGGGGCTAACCAGATCAAAGTGGAAAACCCATCTGCCTTT
AACCTGACGTTTAATAAATTTTATGCCAACGGCCGTGATATTGAAAAAACGGGAATGGTTCCGGCAAAAGGCTCATTGAA
TATTGAACTGCCAGCCGGCACCGGCAAGGTAAGCGAAGTTAAATACAACATTATTAATGACTTTGGCACGGCTGGCGACA
TGTTGACACAGCGCGTTAACTAA

Protein sequence : 
MLALIAQNSFAGGVALSSTRVIYDGSRKEASLTVNNKSTTDEFLIQSWIDDANGNKKTPFIITPPLFKLSPTKNNVLRIV
NTTNTLPQDRESVYWINVKAIPAKSEDAEAKNVLQIAVRTRLKLFYRPAGLKGNSMDGWNKLQFTSAGANQIKVENPSAF
NLTFNKFYANGRDIEKTGMVPAKGSLNIELPAGTGKVSEVKYNIINDFGTAGDMLTQRVN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fim2C AFH78430.1 putative fimbrial chaperone protein Virulence KpGI-5 Protein 2e-40 42
sfaE CAC16952.2 SfaE protein Virulence PAI III 536 Protein 4e-38 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SN31241_2450 YP_008358164.1 Chaperone protein lpfB VFG0455 Protein 6e-98 99
SN31241_2450 YP_008358164.1 Chaperone protein lpfB VFG0445 Protein 1e-40 42
SN31241_2450 YP_008358164.1 Chaperone protein lpfB VFG0875 Protein 4e-40 41
SN31241_2450 YP_008358164.1 Chaperone protein lpfB VFG1644 Protein 2e-38 41
SN31241_2450 YP_008358164.1 Chaperone protein lpfB VFG0911 Protein 2e-38 41