Gene Information

Name : SN31241_21630 (SN31241_21630)
Accession : YP_008360080.1
Strain : Salmonella enterica USMARC-S3124.1
Genome accession: NC_021902
Putative virulence/resistance : Virulence
Product : transcriptional regulatory protein YedW
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2209739 - 2210419 bp
Length : 681 bp
Strand : -
Note : transcriptional regulatory protein YedW PRK11517; Probable transcriptional regulatory protein YedW of Gammaproteobacteria UniRef RepID=YEDW_ECOLI

DNA sequence : 
ATGAAGATTTTATTGATTGAAGATAACCAGAAAACCATTGAGTGGGTACGTCAGGGACTCACGGAAGCAGGCTATGTGGT
TGATTATGCCTGTGATGGACGAGACGGATTACACCTCGCCCTTCAGGAACATTATTCATTGATTATTCTTGATATTATGC
TGCCGGGGCTTGATGGATGGCAGGTTTTACGCGCGTTACGCACTGCGCATCAGTCCCCTGTTATTTGCCTGACGGCGCGC
GACTCGGTTGAGGATCGCGTCAAAGGTCTTGAGGCGGGCGCTAATGATTACCTTGTTAAGCCTTTTTCCTTCGCCGAACT
GCTGGCCCGGGTGAGAGCTCAACTCAGACAGCATGTCCCGGTCTTTACCCGACTGACGATTAATGGTCTGGACATGGATG
CCACAAAGCAATCGGTGTCACGAAATGGCAAACCGATTTCCCTGACCCGCAAAGAATTCCTGCTCCTCTGGTTACTGGCG
TCCCGGGCAGGAGAAATCGTGCCCCGAACCGCGATTGCCAGCGAAGTTTGGGGAATTAACTTTGATAGTGAAACCAACAC
CGTTGATGTCGCGATTCGTCGGCTGCGCGCCAAAGTAGACGATCCATTTGAAAATAAGCTCATTATGACCGTCCGGGGGA
TGGGTTATCGATTACAGGCGGAAGCGTCGCAGAATGGTTAA

Protein sequence : 
MKILLIEDNQKTIEWVRQGLTEAGYVVDYACDGRDGLHLALQEHYSLIILDIMLPGLDGWQVLRALRTAHQSPVICLTAR
DSVEDRVKGLEAGANDYLVKPFSFAELLARVRAQLRQHVPVFTRLTINGLDMDATKQSVSRNGKPISLTRKEFLLLWLLA
SRAGEIVPRTAIASEVWGINFDSETNTVDVAIRRLRAKVDDPFENKLIMTVRGMGYRLQAEASQNG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 1e-102 99
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 8e-102 98

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SN31241_21630 YP_008360080.1 transcriptional regulatory protein YedW BAC0083 Protein 3e-56 58
SN31241_21630 YP_008360080.1 transcriptional regulatory protein YedW BAC0197 Protein 2e-59 58
SN31241_21630 YP_008360080.1 transcriptional regulatory protein YedW BAC0125 Protein 1e-59 56
SN31241_21630 YP_008360080.1 transcriptional regulatory protein YedW BAC0638 Protein 1e-52 56
SN31241_21630 YP_008360080.1 transcriptional regulatory protein YedW BAC0308 Protein 3e-54 55
SN31241_21630 YP_008360080.1 transcriptional regulatory protein YedW BAC0111 Protein 4e-57 53
SN31241_21630 YP_008360080.1 transcriptional regulatory protein YedW BAC0347 Protein 2e-50 51
SN31241_21630 YP_008360080.1 transcriptional regulatory protein YedW NC_007622.3794948.p0 Protein 1e-39 45
SN31241_21630 YP_008360080.1 transcriptional regulatory protein YedW NC_003923.1003417.p0 Protein 1e-39 45
SN31241_21630 YP_008360080.1 transcriptional regulatory protein YedW NC_013450.8614146.p0 Protein 1e-39 45
SN31241_21630 YP_008360080.1 transcriptional regulatory protein YedW NC_002951.3238224.p0 Protein 1e-39 45
SN31241_21630 YP_008360080.1 transcriptional regulatory protein YedW NC_007793.3914065.p0 Protein 1e-39 45
SN31241_21630 YP_008360080.1 transcriptional regulatory protein YedW NC_002758.1121390.p0 Protein 1e-39 45
SN31241_21630 YP_008360080.1 transcriptional regulatory protein YedW NC_010079.5776364.p0 Protein 1e-39 45
SN31241_21630 YP_008360080.1 transcriptional regulatory protein YedW NC_002952.2859858.p0 Protein 1e-39 45
SN31241_21630 YP_008360080.1 transcriptional regulatory protein YedW AE015929.1.gene1106. Protein 2e-33 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SN31241_21630 YP_008360080.1 transcriptional regulatory protein YedW VFG0596 Protein 4e-103 99
SN31241_21630 YP_008360080.1 transcriptional regulatory protein YedW VFG1389 Protein 4e-32 42
SN31241_21630 YP_008360080.1 transcriptional regulatory protein YedW VFG0473 Protein 4e-29 41
SN31241_21630 YP_008360080.1 transcriptional regulatory protein YedW VFG1390 Protein 5e-38 41