Gene Information

Name : SN31241_17960 (SN31241_17960)
Accession : YP_008359713.1
Strain : Salmonella enterica USMARC-S3124.1
Genome accession: NC_021902
Putative virulence/resistance : Virulence
Product : Single-stranded DNA-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1848289 - 1848723 bp
Length : 435 bp
Strand : -
Note : single-stranded DNA-binding protein PRK09010; Single-stranded DNA-binding protein of root UniRef RepID=SSB_SALTI

DNA sequence : 
GTGATCATCTTAGGCCGGGTCGGACAAGACCCGGAGGTTCGTTATTCACCATCAGGGACGGCGTTCGCTAACCTGACAGT
CGCTACATCAGAGCAGTGGCGAGATAAACAGACTGGCGAACAGAAGGAGCTAACTGAATGGCATCGCGTAGCGGTTGTCG
GAAAGCTTGCTGAGGTAGTAAGTCAGTATGTCAAAAAAGGCGATCAGGTTTACTTCGAAGGGATGCTACGCACTCGGAAA
TGGCAAGACCAGTCAGGCCAAGACCGCTACACCACGGAAGTCCACGTTGGCATTAATGGCGTGATGCAGATGCTAGGCGG
CACTGGTGACAGCAAACAGCAAGCAGCCAGTAAGCAGCCGCGGAAACATCAGCAATCAGCGCCCCAACACAGCGAACCGC
CGATGAACTTTGATGACTCAGACATTCCTTTTTAG

Protein sequence : 
MIILGRVGQDPEVRYSPSGTAFANLTVATSEQWRDKQTGEQKELTEWHRVAVVGKLAEVVSQYVKKGDQVYFEGMLRTRK
WQDQSGQDRYTTEVHVGINGVMQMLGGTGDSKQQAASKQPRKHQQSAPQHSEPPMNFDDSDIPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssb NP_807839.1 single-stranded DNA-binding protein Not tested SPI-7 Protein 2e-34 54
ssb AAF14810.1 single strand binding protein Not tested SPI-7 Protein 1e-34 54
ssB NP_458627.1 single strand binding protein Not tested SPI-7 Protein 2e-34 54
ssb AAC26638.1 single-strand binding protein Not tested SPI-4 Protein 2e-30 52
ssb1 YP_005176252.1 single-stranded DNA-binding protein Not tested ICEPmu1 Protein 2e-28 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SN31241_17960 YP_008359713.1 Single-stranded DNA-binding protein VFG0576 Protein 2e-35 54