Gene Information

Name : SN31241_15960 (SN31241_15960)
Accession : YP_008359513.1
Strain : Salmonella enterica USMARC-S3124.1
Genome accession: NC_021902
Putative virulence/resistance : Virulence
Product : Ferric enterobactin transport system permease protein fepD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1643562 - 1644551 bp
Length : 990 bp
Strand : -
Note : iron-enterobactin transporter membrane protein PRK10441; Ferric enterobactin transport system permease protein fepD of Gammaproteobacteria UniRef RepID=FEPD_ECOLI

DNA sequence :
GTGACGCGCGCGTTTGCCGTGCCCGGATTGTTGTTATTACTGAGTCTCGCCGCGATTTTAAGCCTGGTCATTGGCGCGAA
ACCGCTACCCGCCGCCGCCGTGCTGGAGGCGTTCACCGGCGTGTGCCAAAGCGCCGATTGCACCATCGTCATGGATGCGC
GTTTGCCGCGTACGCTGGCCGGATTACTGGCAGGCGGCGCGTTGGGTCTCGCCGGGGCGCTCATGCAAACTCTCACTCGC
AACCCGCTCGCCGACCCGGGGATTCTGGGCGTTAACAACGGCGCCAGCTTCGCCATTGTACTGGGCGCGGCGCTGTTTGG
TTTCTCCACGCCGCTGGAACAGCTTTTCATGGCATTTAGCGGCGCGCTTATCGCATCGCTGATTGTCGCCTTCACCGGTA
GTCAGGGCGGCGGCCAGTTAAGCCCGGTCCGCCTGACACTGGCGGGCGTGGCGCTTGGCGCGGTACTGGAAGGACTGACC
AGCGGCATCGCGCTGTTAAATCCAGAAGTCTATGACCAGCTTCGCTTCTGGCAGGCGGGATCGCTGGACATTCGTAGCCT
GCAAACGTTGAAAGTCGCGCTCGCGCCCGTGGTTATCGCTGGGATCGTGGCGCTATTTCTGAGCCGAGCGCTGAACAGCC
TGAGCCTCGGCAGCGATACCGCGACGGCGCTGGGGAGTAAAGTGGCGCGCACCCAACTTATCGGTTTACTGGCGATTACC
GTCTTGTGCGGCAGCGCAACGGCGCTGGTCGGCCCTATCGCCTTTATTGGTCTGATGATGCCGCATATGGCGCGTTGGCT
GGTGGGCGCAGACCACCGCTGGTCGCTGCCAGTGACGCTACTGGCAACCCCTGCTCTGCTGCTTTTTGCCGATATTATTG
GTCGTCTGTTGGTGCCGGGCGAACTCCGGGTATCGGTCGTCAGTGCGTTTATCGGCGCGCCGGTACTTATCTTTCTGGTA
CGCCGTAAATCGAACGGAGGCGGCCTGTGA

Protein sequence :
MTRAFAVPGLLLLLSLAAILSLVIGAKPLPAAAVLEAFTGVCQSADCTIVMDARLPRTLAGLLAGGALGLAGALMQTLTR
NPLADPGILGVNNGASFAIVLGAALFGFSTPLEQLFMAFSGALIASLIVAFTGSQGGGQLSPVRLTLAGVALGAVLEGLT
SGIALLNPEVYDQLRFWQAGSLDIRSLQTLKVALAPVVIAGIVALFLSRALNSLSLGSDTATALGSKVARTQLIGLLAIT
VLCGSATALVGPIAFIGLMMPHMARWLVGADHRWSLPVTLLATPALLLFADIIGRLLVPGELRVSVVSAFIGAPVLIFLV
RRKSNGGGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagA YP_003782432.1 integral membrane protein Virulence PiCp 1 Protein 1e-31 46
fagA YP_005684490.1 hypothetical protein Not tested PiCp 1 Protein 1e-31 46
fagA YP_005680309.1 hypothetical protein Not tested PiCp 1 Protein 1e-31 46
fagA YP_005682399.1 hypothetical protein Virulence PiCp 1 Protein 1e-31 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SN31241_15960 YP_008359513.1 Ferric enterobactin transport system permease protein fepD VFG0926 Protein 3e-98 90