Gene Information

Name : SN31241_15510 (SN31241_15510)
Accession : YP_008359468.1
Strain : Salmonella enterica USMARC-S3124.1
Genome accession: NC_021902
Putative virulence/resistance : Virulence
Product : Chaperone protein fimC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1596273 - 1596986 bp
Length : 714 bp
Strand : +
Note : fimbrial chaperone protein FimC PRK15195; Chaperone protein fimC of Enterobacteriaceae UniRef RepID=FIMC_SALTY

DNA sequence : 
ATGCAAAAGGTATTTTTTACCATGCTGAATAGTATAAAAGTAGGCTTTATTGTTCTTCTCACGTTATTTACTTCGCTGAA
CGTACAGGCGGCGGGGGGGATTGCATTAGGCGCCACGCGAGTTATTTATCCCTCGGCGGCGAAGCAGACTTCTCTGGCAA
TCAGTAATAGCGATACTCAAGAACGTTACCTCGTCAATTCATGGATCGAAAATAACGCTGGGCAGAAAGAAAAAACGTTT
ATCGTTACGCCGCCTTTATTCGTCAGCGAGCCCAAAAGTGAAAACACGCTGCGTATTATCTACGCCGGGCAACCGCTACC
CGGGGATCGGGAGTCGTTATTCTGGATGAACGTGAAAGCCATCCCGTCGGTCGATAAAAGTCATATTGAAGGAAAAAACG
TTCTGCAACTGGCGATTCTGTCGCGCATCAAACTGTTCGTGCGTCCGGCGAATTTGCCGCAGACGCCGGAAGACGCGCCG
ACCTTGCTGAAATTTTCCCGTGTCGGCAACCATCTCAAGATAACCAACCCATCTGCTTATTACCTCACGCTGGTCAATAT
CAGCGTGGGCGCGAAAAAGATTGATAACGTGATGATCGCGCCAAAAAGCGACATGCAAATTCCCTTACCGACTGGCGCGC
AGGGCAGCGTGACATTTCAGACAGTCAATGATTACGGCGCATTGACGTCGGCGACAACGGCCAGTCTCGGTTAA

Protein sequence : 
MQKVFFTMLNSIKVGFIVLLTLFTSLNVQAAGGIALGATRVIYPSAAKQTSLAISNSDTQERYLVNSWIENNAGQKEKTF
IVTPPLFVSEPKSENTLRIIYAGQPLPGDRESLFWMNVKAIPSVDKSHIEGKNVLQLAILSRIKLFVRPANLPQTPEDAP
TLLKFSRVGNHLKITNPSAYYLTLVNISVGAKKIDNVMIAPKSDMQIPLPTGAQGSVTFQTVNDYGALTSATTASLG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sfaE CAC16952.2 SfaE protein Virulence PAI III 536 Protein 6e-48 51
fim2C AFH78430.1 putative fimbrial chaperone protein Virulence KpGI-5 Protein 8e-52 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SN31241_15510 YP_008359468.1 Chaperone protein fimC VFG0445 Protein 6e-104 99
SN31241_15510 YP_008359468.1 Chaperone protein fimC VFG1644 Protein 3e-48 51
SN31241_15510 YP_008359468.1 Chaperone protein fimC VFG0911 Protein 3e-48 50
SN31241_15510 YP_008359468.1 Chaperone protein fimC VFG0875 Protein 4e-53 47
SN31241_15510 YP_008359468.1 Chaperone protein fimC VFG0455 Protein 2e-40 42