Gene Information

Name : SN31241_14170 (SN31241_14170)
Accession : YP_008359334.1
Strain : Salmonella enterica USMARC-S3124.1
Genome accession: NC_021902
Putative virulence/resistance : Unknown
Product : Riboflavin biosynthesis protein RibD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1460837 - 1461940 bp
Length : 1104 bp
Strand : +
Note : bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase PRK10786; Riboflavin biosynthesis protein RibD of Bacteria UniRef RepID=RIBD_ECOLI

DNA sequence :
ATGCAGGATGAGTTTTACATGGCGCGAGCGCTCAAACTGGCGCAGCGTGGACGTTTCACCACTCACCCGAACCCTAATGT
CGGCTGTGTCATTGTTAACAATGGCGACATCGTCGGCGAAGGTTATCACCATCGCGCCGGAGAGCCGCACGCCGAGGTCC
ATGCGCTGCGGATGGCGGGCGCAAAAGCCAAAGGCGCAACCGCCTATGTCACGCTTGAACCCTGTAGCCATCATGGGCGA
ACGCCGCCATGTTGCGATGCGCTGATTGCGGCCGGCGTCGCGCGCGTGGTCGCCGCGATGCAGGACCCGAACCCACAGGT
CGCCGGGCGCGGGCTGTATCGCCTGCAACAGGCGGGTATTGCGGTCAGCCACGGGTTAATGATGAGTGAAGCGGAGGCGC
TCAATAAAGGCTTCCTCAAACGGATGCGTACCGGATTCCCTTATCTTCAGCTTAAACTGGGCGCCTCCGTGGATGGACGG
ACGGCGATGGCCAGCGGCGAAAGCCAGTGGATCACCTCGCCGCAGGCCCGGCGCGACGTTCAGCGCTTGCGTGCGCAAAG
TCACGCTATCTTAACCAGTAGCGCGACGGTATTGGCTGACGATCCGGCCTTGACGGTGCGTTGGGCGGAGTTAGATGCCT
CTACGCAGGCGTCTTACCCGCAGGAAAATCTGCGCCAGCCGGTGCGAATTGTTATCGACAGCCAAAACCGGGTAACGCCT
GCGCATCGTATTGTGCAGCAGCCTGGCGAAACGTGGATCGCGCGTACCCAGGAAGATAGCCGCGCGTGGCCCGATGCGGT
TCGTACTATCAGCGTGCCGGCGCACAACGGACATTTGGATCTGGTTGTACTGATGATGCAGTTAGGCAGGCAGCAGATTA
ATAGCATATGGGTTGAAGCCGGACCGGGACTGGCAGGCGCGTTGTTGCAAGCCGGGCTGGTGGATGAACTGATTGTCTAT
GTCGCGCCTAAATTGTTGGGAACCCAGGCGCGGGGATTATGCGAATTGCCGGGGCTTGAGAAGCTCGCCGACGCGCCGCA
ATTTACCTTCAGCGAAATACGCCATGTCGGCCCGGATGTTTGCCTGCATATGGTGAGCGCATGA

Protein sequence :
MQDEFYMARALKLAQRGRFTTHPNPNVGCVIVNNGDIVGEGYHHRAGEPHAEVHALRMAGAKAKGATAYVTLEPCSHHGR
TPPCCDALIAAGVARVVAAMQDPNPQVAGRGLYRLQQAGIAVSHGLMMSEAEALNKGFLKRMRTGFPYLQLKLGASVDGR
TAMASGESQWITSPQARRDVQRLRAQSHAILTSSATVLADDPALTVRWAELDASTQASYPQENLRQPVRIVIDSQNRVTP
AHRIVQQPGETWIARTQEDSRAWPDAVRTISVPAHNGHLDLVVLMMQLGRQQINSIWVEAGPGLAGALLQAGLVDELIVY
VAPKLLGTQARGLCELPGLEKLADAPQFTFSEIRHVGPDVCLHMVSA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 3e-57 45
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 3e-57 45