Gene Information

Name : SN31241_12970 (SN31241_12970)
Accession : YP_008359214.1
Strain : Salmonella enterica USMARC-S3124.1
Genome accession: NC_021902
Putative virulence/resistance : Virulence
Product : Periplasmic fimbrial chaperone protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1333898 - 1334638 bp
Length : 741 bp
Strand : +
Note : pili assembly chaperone protein SafB PRK15224; Periplasmic fimbrial chaperone protein of Salmonella enterica UniRef RepID=C0Q6R9_SALPC

DNA sequence : 
ATGAAAATTATTAGTTTTGGTGTAATGGCGGCTGTTTTATTCGTCTCTAATTCTATAACTCCTCCAGTGTATGCCTCTGA
GCAGAAATTAAATTTAAACACTAAATCATTCAGCGTGAAGCTGGGGGCTACACGGGTGATTTATCACGCTGGTACAGCTG
GAGCCACGCTCTCGGTGAGCAACCCGCAGAATTACCCTATTTTGGTTCAGTCTTCAGTCAAAGCAGCAGACAAAAGTTCG
CCTGCTCCCTTTTTGGTGATGCCGCCTCTATTTCGTTTAGAAGCGAACCAGCAGAGTCAACTGCGTATTGTCCGTACTGG
TGGTGACATGCCAACGGATCGTGAAACTTTACAGTGGGTCTGTGTAAAGGCGGTACCACCCGAAAATGAACCGTCGGATA
CACAGGCTAAGGGCGCGACCCTTGACCTCAATTTGTCCATCAACGTCTGTGATAAGCTGATTTTCCGCCCGGATGCCGTG
AAGGGGACGCCGGAAGATGTTGCAGGAAATTTAAGATGGGTGGAGACGGGCAACAAACTTAAGGTGGAGAACCCCACCCC
GTTTTACATGAATTTAGCCTCCGTCACAGTAGGGGGAAAGCCCATTACAGGGCTTGAGTATATCCCCCCCTTTGCTGACA
AAACACTAAATATGCCAGGTGGCACTCGTGGTGATATCGAGTGGAGCGTTATTACAGACTTTGGTGGTGAAAGTCATCCG
TTCCACTACGTCCTTAAATAA

Protein sequence : 
MKIISFGVMAAVLFVSNSITPPVYASEQKLNLNTKSFSVKLGATRVIYHAGTAGATLSVSNPQNYPILVQSSVKAADKSS
PAPFLVMPPLFRLEANQQSQLRIVRTGGDMPTDRETLQWVCVKAVPPENEPSDTQAKGATLDLNLSINVCDKLIFRPDAV
KGTPEDVAGNLRWVETGNKLKVENPTPFYMNLASVTVGGKPITGLEYIPPFADKTLNMPGGTRGDIEWSVITDFGGESHP
FHYVLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
safB NP_454906.1 periplasmic fimbrial chaperone protein Not tested SPI-6 Protein 6e-112 97
afaB AAK16197.1 AfaB Virulence PAI-I AL862 Protein 1e-55 46
afaB ADD91742.1 putative AfaB-VIII periplasmic chaperone Not tested PAI-I AL862 Protein 1e-55 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SN31241_12970 YP_008359214.1 Periplasmic fimbrial chaperone protein VFG0943 Protein 8e-53 53
SN31241_12970 YP_008359214.1 Periplasmic fimbrial chaperone protein VFG0852 Protein 6e-53 50
SN31241_12970 YP_008359214.1 Periplasmic fimbrial chaperone protein VFG0850 Protein 1e-54 50
SN31241_12970 YP_008359214.1 Periplasmic fimbrial chaperone protein VFG0858 Protein 7e-52 49