Gene Information

Name : SN31241_12660 (SN31241_12660)
Accession : YP_008359183.1
Strain : Salmonella enterica USMARC-S3124.1
Genome accession: NC_021902
Putative virulence/resistance : Virulence
Product : Hemolysin-coregulated protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1305691 - 1306176 bp
Length : 486 bp
Strand : +
Note : Type VI protein secretion system component Hcp (secreted cytotoxin) COG3157; Hemolysin-coregulated protein of Proteobacteria UniRef RepID=B4SV55_SALNS

DNA sequence :

ATGGCTTATGACATTTTTTTGAAAATTGACGGCATTGATGGCGAGTCAATGGATGACAAACACAAAAATGAAATTGAAGT
ACTGAGCTGGCGCTGGAATATTCATCAGGAATCCACCATGCACGCCGGTAGCGGCCTCGGCTCCGGTAAGGTCTCCGTCA
CCAACCTGGATTTTGATCACTATATCGACCGCGCCAGCCCGAACCTGTTCAAATACTGCGCCTCCGGCAAGCACATTCCG
CAGGCCATTCTGGTTATGCGTAAGGCTGGCGGCAATCCGCTGGAGTACCTCAAGTATACCTTCACCGACCTGATTGTCGC
CGTGGTTTCCCCGAGCGGCAGCCACGATGGTGAAATCGCCTCCCGTGAAACGGTCGAGCTTTCTTTCAGCACTGTGAAAC
AGGAATACGTGGTGCAGAACCAGCAGGGCGGCAGCGGCGGCACTATCACCGCAGGCTACGACTTCAAGGCCAACAAAGAA
ATTTAA

Protein sequence :

MAYDIFLKIDGIDGESMDDKHKNEIEVLSWRWNIHQESTMHAGSGLGSGKVSVTNLDFDHYIDRASPNLFKYCASGKHIP
QAILVMRKAGGNPLEYLKYTFTDLIVAVVSPSGSHDGEIASRETVELSFSTVKQEYVVQNQQGGSGGTITAGYDFKANKE
I

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
STY0302	NP_454882.1	conserved hypothetical protein	Not tested	SPI-6	Protein	5e-72	100

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
SN31241_12660	YP_008359183.1	Hemolysin-coregulated protein	VFG2071	Protein	1e-23	45