Gene Information

Name : SN31241_1240 (SN31241_1240)
Accession : YP_008358043.1
Strain : Salmonella enterica USMARC-S3124.1
Genome accession: NC_021902
Putative virulence/resistance : Virulence
Product : RmbA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 126708 - 127244 bp
Length : 537 bp
Strand : -
Note : RmbA of Enterobacteriaceae UniRef RepID=B4SXG3_SALNS

DNA sequence :
GTGCAATACTGTCATAATGCGGCATTTTCCATCTGGCCAGATGGTAATGCTTTCCTGAAAAAAGGGTTTATTGAAAAGTT
ATTGCTTGATAGACACAACCATTTATCCAGCGGTTTTATCTTTGTTGATTTTTCTTTCCCGAATCTTCGACGATTTACCG
ATCTGCAATGGGCTGACAGTCTGGCAGACAGTGGCATGCATATTGTCCTGATTTCTGACAGAAGTTTAACTCCGCTGGCC
AATTACTGGATTTTGAAAAGCAATAAAATACAAGGAATTATTTATTCCGATGACGATGATATTGTGCAACAGCAAAAGAT
GCACCGCTTGTTTACCGGTCGGCTCGCCAACAGTAAACGTGGACGAACGCTTAACTATACGGAATTTATATTACTGAAGC
GCTTTGTATCAGGAATAAGTATTCAGCAGATTGTAAATATTGACAATATTGATATTAAGAAACTTTATGTGCATAAGCTG
CGGCTTGAAAATAAGCTAGGGCATAGCATTCAGAAAATAATATCAAATATTTTATAG

Protein sequence :
MQYCHNAAFSIWPDGNAFLKKGFIEKLLLDRHNHLSSGFIFVDFSFPNLRRFTDLQWADSLADSGMHIVLISDRSLTPLA
NYWILKSNKIQGIIYSDDDDIVQQQKMHRLFTGRLANSKRGRTLNYTEFILLKRFVSGISIQQIVNIDNIDIKKLYVHKL
RLENKLGHSIQKIISNIL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rmbA YP_218664.1 hypothetical protein Not tested SPI-3 Protein 4e-72 99
rmbA NP_462655.1 hypothetical protein Not tested SPI-3 Protein 2e-72 99
rmbA AAD16953.1 RmbA Not tested SPI-3 Protein 1e-72 99
rmbA NP_458174.1 conserved hypothetical protein Not tested SPI-3 Protein 8e-72 98
unnamed AAO49826.1 RmbA Not tested SPI-3 Protein 2e-71 98

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SN31241_1240 YP_008358043.1 RmbA VFG0567 Protein 5e-73 99