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Name : SN31241_10000 (SN31241_10000) Accession : YP_008358918.1 Strain : Salmonella enterica USMARC-S3124.1 Genome accession: NC_021902 Putative virulence/resistance : Virulence Product : outer membrane usher protein ElfC Function : - COG functional category : - COG ID : - EC number : - Position : 1012367 - 1015033 bp Length : 2667 bp Strand : + Note : outer membrane usher protein PRK15193; Probable outer membrane usher protein ElfC of Gammaproteobacteria UniRef RepID=ELFC_ECOLI DNA sequence : TTGGCGCAACGACGCCAGCACGCGTTTGTCCAGCTTCATGATGTTATGCGTAATCAGCTTTTCATGACGCGATATTACTC CAGCGTAACTAAACCCGTATTAACCCCGCTGGCGTTGGCTATCGCACTGGCACCTGCGCCGGGGTGGGCGGAAAACTATT TCAACCCGGCATTTCTGTCTGACGACCCGTCTGCGGTGGCCGACCTATCGACCTTTTCCCGTAATGCCCAGGCGGCGGGG ATGTATCGCGTTGACGTTTACCTGAACAATACGTTTCTCGCGACCAGAGACATTGCCTTCCAGGCGGTGAAAACGACGGG AAAAAGCGCGCCCACCGATGACAGCGGATTACGCGCCTGCCTGACGCCTGAAATGCTTAAAAATATGGGGGTAAACACCG GGGCGTTTCCACTGTTGGCGAAGGCGGCGGCGGGAAGTTGCCCGGATCTCGCCAGTGCGATACCGGCCGCCCGGACCCGC TTTGATTTTGCGCAGCAACGTCTCGACATTAGCATCCCGCAGGCGGCGATGGTTGCCAGCGCCAGAGGCTATATCCCACC GCAATACTGGGATGAAGGTATTAACGCGTTGCTATTGAATTACACCTTTACCGGCGCGAATAGTCAGGATCGGAGCCCAG GCGGCAGTGCGGAGAACAGCTATTTTCTTGGATTGAATAGCGGCCTTAATCTGGGGGCCTGGCGGTTACGCGACTACTCC ACATGGAACGCGAATAGCGGCGATCAGAATAGCGACAGCGACTGGCAGCACATCAGTACTTATCTGGAACGTGATGTGGT CTTTTTGCAGGGAGAACTGACGGCAGGCGATAGTTATACCCCCTCCGCATTATTCGACAGCCTTCCTTTTCGCGGGCTAC AACTGGCGTCTGACGACAATATGTTGCCAGACAGCATGAAGGGCTTCGCGCCGACCATTCACGGCATTGCCAGAAGCAAC GCGCAAGTGACCATTCGGCAAAACGGCTACATCATTAATCAGCGCTATGTGCCGCCCGGGGCATTTACTATTAATGATCT CTATCCTACCGCCGCCAGCGGCGATTTGACTGTGGAAGTCAAAGAGTCCGACGGTTCTATTAATCGTTATAACGTGCCCT ATTCCGCCGTGCCGATTCTACAACGAGAAGGGCGGCTGAAGTATGCGGCGACGGTGGCGGAGTATCGCAGCGAGAGTAGT CAAAAAGAGAAGGTGAAATTCAGTCAGGCGACCTTGATATGGGGGTTACCGCATGGTTTTACGCTGTATGGCGGAACACA ACTTTCCAGTCATTATCACGCGCTGGCGATCGGCAGCGGCGCAAATCTGGGCGACTGGGGCGCGGTGTCGCTGGATGTCA CCCAGGCTACCAGTACGCTGGCGGATAATAACACCTACCAGGGGCAATCGCTGCGTTTCCTGTATGCCAAATCGCTTGCA CAGTCAGGAACCAATTTACAGCTTATGGGCTATCGCTATTCAACCTCGGGCTTTTACACGTTGGATGATACCACGTGGAA ACGGATGAGCGGCTATGACGATGACAGTCGGACTGACAGCGATAAAAGCAGGCCGGAATGGGCGGATTATTACAATCTTT ATTATACCAGGAGGGGCAAAGTACAACTCGATATTAACCAACAGCTAGGCGGGTTGGGATCGCTTTTTATTACCGGCAGT CAGCAAAGTTATTGGCACACTGATGAAAAGGATTCTTTGTTGCAGGTGGGATACAGCGATACGCTGGCGGGTATTGCATG GAGCGTTTCTTACAACAATAACAAATCCGCAGGCGATGCGGAGCGCGATCAAATTTTCGCGCTGAATATCTCGGTGCCGC TAAGTCAATGGCTGCAACACGATGATGAGGTCACGCGCCATCACAATGTTTACGCTACCTTTAGCACCAGTACGGACAAA CAGCATAACGTTACGCAGAATGCGGGCCTTAGCGGCACACTGCTGGACGAAAACAATCTTAGTTACAACATACAGCAAGG TTATCAGAATCACGGTATTGGCGAAAGCGGCGCCGCCAGTCTGGAATACGATGGCGCGAAAGGCAACGCCAACATTGGCT ATAACGTTAGCGATAACGGCGATTACCAGCAGGTGAATTATGGCCTGAGCGGCGGCCTGGTGGCGCACGCGCATGGAGTG ACACTAAGCCAGCCGCTGGGCAATACCAATATTTTGATTGCCGCGCCGGGCGCAGCCAACGTCGGCGTTGTCGACCAGCC GGGTATTCATACGGACGCGCGTGGCTATGCGGTGGTGCCGTATGCGACAACATATCGCCAAAACCGTATGGCGCTGGACG TTAACGCCATGGCTGATGATGTCGATATTGATGACGCGGTGACTCGCGTTGTGCCGACCGAAGGCGCGCTGGTTCTGGCC CGCTTTAAAGCGCGAGTCGGCGCGCGTGCCCTGGTAACGCTGAATCATAACGGTAAGCCTGTACCCTTTGGCGCAACGGT GACGGTGAATGATCGCCATGCGGAGGCGATTGTTGACGAAGCCGGGGAGGTCTATCTTTCCGGGTTGTCAGCGCAAGGCG TTCTGCACGTTCGCTGGGGGAACCTGCCGGATCAACAGTGCGTCGCGTCCTATCATCTCTCTTCCTCCCGTCAGATTCTG AGTCGACAACATGCGGAGTGTCATTAA Protein sequence : MAQRRQHAFVQLHDVMRNQLFMTRYYSSVTKPVLTPLALAIALAPAPGWAENYFNPAFLSDDPSAVADLSTFSRNAQAAG MYRVDVYLNNTFLATRDIAFQAVKTTGKSAPTDDSGLRACLTPEMLKNMGVNTGAFPLLAKAAAGSCPDLASAIPAARTR FDFAQQRLDISIPQAAMVASARGYIPPQYWDEGINALLLNYTFTGANSQDRSPGGSAENSYFLGLNSGLNLGAWRLRDYS TWNANSGDQNSDSDWQHISTYLERDVVFLQGELTAGDSYTPSALFDSLPFRGLQLASDDNMLPDSMKGFAPTIHGIARSN AQVTIRQNGYIINQRYVPPGAFTINDLYPTAASGDLTVEVKESDGSINRYNVPYSAVPILQREGRLKYAATVAEYRSESS QKEKVKFSQATLIWGLPHGFTLYGGTQLSSHYHALAIGSGANLGDWGAVSLDVTQATSTLADNNTYQGQSLRFLYAKSLA QSGTNLQLMGYRYSTSGFYTLDDTTWKRMSGYDDDSRTDSDKSRPEWADYYNLYYTRRGKVQLDINQQLGGLGSLFITGS QQSYWHTDEKDSLLQVGYSDTLAGIAWSVSYNNNKSAGDAERDQIFALNISVPLSQWLQHDDEVTRHHNVYATFSTSTDK QHNVTQNAGLSGTLLDENNLSYNIQQGYQNHGIGESGAASLEYDGAKGNANIGYNVSDNGDYQQVNYGLSGGLVAHAHGV TLSQPLGNTNILIAAPGAANVGVVDQPGIHTDARGYAVVPYATTYRQNRMALDVNAMADDVDIDDAVTRVVPTEGALVLA RFKARVGARALVTLNHNGKPVPFGATVTVNDRHAEAIVDEAGEVYLSGLSAQGVLHVRWGNLPDQQCVASYHLSSSRQIL SRQHAECH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| fim2D | AFH78429.1 | putative fimbrial usher protein | Virulence | KpGI-5 | Protein | 0.0 | 51 |
| sfaF | CAC16953.2 | SfaF protein | Virulence | PAI III 536 | Protein | 0.0 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SN31241_10000 | YP_008358918.1 | outer membrane usher protein ElfC | VFG0876 | Protein | 0.0 | 52 |
| SN31241_10000 | YP_008358918.1 | outer membrane usher protein ElfC | VFG1645 | Protein | 0.0 | 50 |
| SN31241_10000 | YP_008358918.1 | outer membrane usher protein ElfC | VFG0912 | Protein | 0.0 | 50 |
| SN31241_10000 | YP_008358918.1 | outer membrane usher protein ElfC | VFG0446 | Protein | 1e-178 | 49 |
| SN31241_10000 | YP_008358918.1 | outer membrane usher protein ElfC | VFG0454 | Protein | 4e-163 | 43 |
