Gene Information

Name : SN31241_9990 (SN31241_9990)
Accession : YP_008358917.1
Strain : Salmonella enterica USMARC-S3124.1
Genome accession: NC_021902
Putative virulence/resistance : Virulence
Product : Chaperone protein FimC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1011649 - 1012407 bp
Length : 759 bp
Strand : +
Note : fimbrial chaperone protein BcfB PRK15188; Chaperone protein FimC of Enterobacteriaceae UniRef RepID=B4TIC6_SALHS

DNA sequence :
TTGGGAGGCGAGAAAGGGGCGTTACGCGCGTCACTGCGCGTAACAAACCGACGGCATCAGGATATTACGCAGATGAAAAA
AAACGTACCGATTTTCCTTCGATTATTGCTACTGCTGTCGGCGGCCGGCCTGTCGTTTGCCGCGCAGGCGGGAGGCATTG
CGCTGGGCGCGACCAGAGTGATTTATCCGCAGGGAAGTAAGCAAACCTCCTTGCCGATTATTAATTCTTCTGCCAGCAAT
GTTTTTTTAATTCAGTCATGGGTCGCCAATGCCGATGGTTCACGCTCGACGGATTTTATCATTACGCCGCCTCTCTTTGT
GATCCAGCCTAAAAAAGAAAATATATTACGTATTATGTATGTCGGGCCGTCATTACCGACCGATCGCGAAAGCGTATTTT
ATTTAAACAGTAAAGCGATACCCTCTGTCGATAAAAATAAATTGACCGGCAACTCCCTGCAAATTGCGACGCAAAGCGTG
ATTAAGCTATTTATTCGGCCGAAAAATCTGGCGGAGGCGCCAGCTCATGCCCCGTCGACGCTTCGCTGCCGTAACGAGCG
CGGCCAGCTAACGATTACTAACCCTTCGCCGTACTACGTTTCGATGGTTGAACTGTACAGCGCGGGGAAAAAACTGCCGA
ATACTATGGTACCGCCGAAAGGCGCGATCACTCTCCCGGCGACGCCCGGCCAGGTATCTTTGCGCACGGTAAACGATTTT
GGCGCAACGACGCCAGCACGCGTTTGTCCAGCTTCATGA

Protein sequence :
MGGEKGALRASLRVTNRRHQDITQMKKNVPIFLRLLLLLSAAGLSFAAQAGGIALGATRVIYPQGSKQTSLPIINSSASN
VFLIQSWVANADGSRSTDFIITPPLFVIQPKKENILRIMYVGPSLPTDRESVFYLNSKAIPSVDKNKLTGNSLQIATQSV
IKLFIRPKNLAEAPAHAPSTLRCRNERGQLTITNPSPYYVSMVELYSAGKKLPNTMVPPKGAITLPATPGQVSLRTVNDF
GATTPARVCPAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fim2C AFH78430.1 putative fimbrial chaperone protein Virulence KpGI-5 Protein 6e-45 51
sfaE CAC16952.2 SfaE protein Virulence PAI III 536 Protein 3e-42 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SN31241_9990 YP_008358917.1 Chaperone protein FimC VFG0875 Protein 4e-46 52
SN31241_9990 YP_008358917.1 Chaperone protein FimC VFG0445 Protein 5e-48 51
SN31241_9990 YP_008358917.1 Chaperone protein FimC VFG1644 Protein 2e-42 49
SN31241_9990 YP_008358917.1 Chaperone protein FimC VFG0911 Protein 2e-42 49
SN31241_9990 YP_008358917.1 Chaperone protein FimC VFG0455 Protein 7e-35 42