Gene Information

Name : CTRC966_03790 (CTRC966_03790)
Accession : YP_008354307.1
Strain : Chlamydia trachomatis RC-J/966
Genome accession: NC_021898
Putative virulence/resistance : Virulence
Product : type III secretion system ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 825192 - 826496 bp
Length : 1305 bp
Strand : -
Note : COG1157 Flagellar biosynthesis/type III secretory pathway ATPase

DNA sequence :
ATGACTCATTTACAAGAAGAAACTCTGTTGATCCATCAATGGCGCCCGTATCGAGAATGTGGGATTTTATCACGCATATC
AGGATCTCTTCTGGAAGCTCAAGGGCTCTCCGCATGCTTAGGAGAACTCTGTCAAATTTCTCTATCTCGGTCAGACCCTA
TTCTAGCTGAAGTAATTGGCATTCACAATCGCACGACATTATTACTCGCTCTGACTCCCATATACTATCTTGCCATAGGA
GCCGAAGTAGTTCCCTTACGCAGGCCTGCCTCTCTTCCTCTATCCAACCATCTTTTAGGAAGAGTCCTTGATGGATTCGG
GAACCCTTTAGATGGAGGATCTCAGCTCCCTAAAACGAACCTTTCCCCTCTATTTTCTTCTCCCTCTTCTCCTATGTCGC
GTACTCCGATCCAAGAGGTATTCCCTACAGGTATCCGCGCAATCGACGCCCTCCTTACCATAGGAGAAGGACAACGCGTA
GGCATCTTTTCAGAGCCTGGAGGAGGGAAATCTTCTCTTCTGTCTACGATAGCAAAGGGTTCCCAACAGACAATCAATGT
CATTGCCCTAATAGGAGAACGTGGTCGTGAGGTGCGCGACTATGTCAACCAACACAAAGAAGGCCTAGCCGCTCAACGTA
CCGTTATCATCGCCTCTACCGCTTATGAAACTGCAGCTAGCAAAGTCATTGCAGGCCGCGCAGCAATCACAATCGCAGAA
TATTTTCGAGATCAAGGAGCTCGCGTATTATTTACTATGGATTCCTTATCTAGATGGATAGAATCCCTTCAAGAAGTAGC
GATCGCGAGAGGAGAGACACTATCTACACACCACTATGCTGCATCCGTTTTCCATCATGTTGCAGAGTTCCTAGAACGTG
CTGGGAATAATGATAAAGGATCTATCACATCTTTTTATGCCATTTTGCATTACGCAAACCATCCAGATATTTTTACTGAT
TATGTAAAATCTCTTCTGGATGGGCATTTCTTTCTCTCCCCTCAAGAAAAAAGCTTTTCTTCTCCTCCTATCAATGTATT
AACGAGCCTTTCGCGGTCTTCTCGTCAGTTAGCTCTCCCTCATCATTATGCTGCAGCTCAAGAGCTTCTCTCCTTACTCA
AAGCCTATCATGAAGCTATTGATATCATCCAACTAGGAGCTTATGTCTCAGGACAAGATGCTCACCTCGATAGAGCCATT
CGTTTGCTCCCCTCCGTAAAACAATTTTTATCTCAACCTTATTCTCATTACTCAGCTATTCATGAAACTATTGAACAACT
GTGCCAACTGTTGAAACATGAATAA

Protein sequence :
MTHLQEETLLIHQWRPYRECGILSRISGSLLEAQGLSACLGELCQISLSRSDPILAEVIGIHNRTTLLLALTPIYYLAIG
AEVVPLRRPASLPLSNHLLGRVLDGFGNPLDGGSQLPKTNLSPLFSSPSSPMSRTPIQEVFPTGIRAIDALLTIGEGQRV
GIFSEPGGGKSSLLSTIAKGSQQTINVIALIGERGREVRDYVNQHKEGLAAQRTVIIASTAYETAASKVIAGRAAITIAE
YFRDQGARVLFTMDSLSRWIESLQEVAIARGETLSTHHYAASVFHHVAEFLERAGNNDKGSITSFYAILHYANHPDIFTD
YVKSLLDGHFFLSPQEKSFSSPPINVLTSLSRSSRQLALPHHYAAAQELLSLLKAYHEAIDIIQLGAYVSGQDAHLDRAI
RLLPSVKQFLSQPYSHYSAIHETIEQLCQLLKHE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssaN YP_216423.1 type III secretion system ATPase Virulence SPI-2 Protein 7e-55 41
ssaN NP_456113.1 putative type III secretion ATP synthase Virulence SPI-2 Protein 2e-55 41
ssaN NP_805086.1 type III secretion system ATPase Virulence SPI-2 Protein 2e-55 41
ssaN CAA70537.1 secretion system apparatus Virulence SPI-2 Protein 4e-55 41
ssaN NP_460380.1 type III secretion system ATPase Virulence SPI-2 Protein 5e-55 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CTRC966_03790 YP_008354307.1 type III secretion system ATPase VFG0515 Protein 2e-55 41