Gene Information

Name : CTRC69_01490 (CTRC69_01490)
Accession : YP_008351077.1
Strain : Chlamydia trachomatis RC-F/69
Genome accession: NC_021895
Putative virulence/resistance : Virulence
Product : ATP-dependent Clp protease
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 321626 - 324190 bp
Length : 2565 bp
Strand : +
Note : COG0542 ATPases with chaperone activity, ATP-binding subunit

DNA sequence :
ATGTTTGAGAAGTTTACCAATCGCGCAAAGCAAGTGATTAAGTTGGCGAAAAAAGAGGCTCAACGACTCAATCACAACTA
TCTAGGAACCGAGCACATCTTGTTAGGATTACTAAAATTAGGCCAGGGTGTGGCTGTTAATGTATTACGCACTCTTGGTG
TTGACTTCGATACAGCAAAGCACGAAGTAGAAAGGCTGATTGGCTATGGCCCCGAGATTCAAGTTTACGGAGATCCAGCT
CTTACTGGAAGAGTGAAGAAATCTTTTGAATCCGCTAATGAAGAAGCTGCTCTTTTAGAACACAATTATGTTGGAACTGA
ACATCTTTTGTTAGGTATTCTCAATCAATCCGATGGAGTGGCTTTGCAAGTATTAGAAAATTTGCACGTGGATCCTAAAG
AAATCCGAAAAGAGATTTTAAAAGAATTAGAAACATTTAATTTACAACTCCCCCCTTCTTCCTCCATCACTCCTAGAAAT
ACTAATAGCTCTTCTTCTTCGAAATCTTCTTCTCCTTTAGGAGGTCATACTTTGGGCGGAGATAAACCTGAAAAACTTTC
AGCTTTGAAGGCGTACGGTTACGACTTAACAGAAATGTTTAAAGAATCGCGCCTCGATCCAGTGATCGGGCGTTCTGCAG
AAGTCGAACGATTAATTTTAATTCTTTGTCGTCGAAGAAAAAATAACCCAGTCTTAGTTGGAGAAGCTGGAGTAGGGAAA
ACAGCCATTGTAGAAGGCCTCGCTCAGAAAATTGTCTCAGGAGAAGTTCCTGAAGCTCTTCGTAAAAAACGCTTGATCAC
TTTAGATTTGGCTCTAATGATTGCAGGAACCAAATACAGAGGGCAGTTTGAAGAACGCATCAAAGCTGTGATGGATGAAG
TTCGTAAACATGGGAACATCCTCTTATTTATTGATGAGCTTCACACGATTGTTGGTGCAGGAGCTGCTGAAGGAGCTATC
GATGCTTCTCATATTCTAAAACCAGCTCTAGCTCGAGGAGAAATTCAGTGCATTGGCGCTACGACCCTAGATGAATACCG
TAAACATATAGAAAAAGATGCCGCTTTAGAACGTCGGTTCCAAAAAATCGTTGTTCAACCTCCTAGCGTCGATGAAACAG
TAGAAATTCTCAGAGGTTTAAAGAAAAAATACGAAGAGCATCACAATGTCTTCATCACTGATGAAGCACTCGTTGCTGCA
GCTAAACTCTCTGACCAATATGTTCATGGTCGATTTCTTCCTGATAAAGCAATTGACCTCTTGGATGAAGCTGGAGCTCG
TGTACGAGTCAATACGATGGGACAACCTTCGGACCTGATCCGTCTAGAAGCTGAGATAGAAAAAACAAAACAAGCTAAAG
AGCAAGCTATCGGAACTCAGGAATACGAAAAAGCTGCTAGCCTTCGTGATGAAGAGAAGAAGTTAAGAGAAAAATTAGGA
AATATGAAACAACAGTGGGAGTCCAATAAGGAAGAACATCAAGTTCCCGTTGATGAAGAAGCTGTTGCACAAGTAGTTTC
CGTACAAACAGGAATTCCTGCAGCTCGTTTAACAGAAGCTGAAAGCGAAAAACTTTTAACCTTAGAAACGACTCTACAAA
AGAAAGTAATCGGCCAAAGTCAAGCTGTTGCTAGTATCTGTAGAGCTATCCGTCGTTCTAGAACAGGCATCAAAGATCCT
AATAGACCTATGGGATCCTTCCTATTTTTGGGCCCAACTGGTGTCGGGAAGACTTTATTAGCGCAGCAAATCGCAATTGA
GATGTTTGGAGGAGAAGATTCTCTTATTCAAGTGGACATGTCTGAGTACATGGAAAAATTTGCAGCCACTAAGATGATGG
GATCTCCTCCAGGATATGTCGGTCATGAGGAAGGGGGTCATCTAACAGAGCAAGTCCGTCGCCGCCCTTACTGTGTTGTG
TTGTTTGATGAAATTGAAAAAGCACATCCAGATATTATGGACCTTATGCTTCAGATTTTGGAGCAAGGGCGTTTAACAGA
CTCATTTGGACGTAAGATCGATTTTCGTAATACCATCATCATTATGACTTCTAACCTAGGAGCAGATTTAATTCGGAAAA
GTGGTGAAATAGGGTTTGGGCTTCGTTCTCACATGGACTATGCAGTTATCAAAGAGAAAATAGATGCTGCAGTTAAGAAG
CATTTAAAACCTGAGTTTATCAACCGTTTAGATGAGAGTGTTATCTTTAAGCCTCTTGAAAAAGAAGCTCTTTCAGAGAT
TATCCATCTAGAAATTAATAAGCTGGGCTCTCGTTTACAAAACTATCAAATGGATCTTAATATTCCTGATTCAGTGATTT
CCTTTTTGGTAACTAAAGGGCATTCGCCAGAAATGGGAGCTCGACCTTTAAGACGTGTTGTGGAGCAGTATCTGGAGGAT
CCTTTGGCAGAAATGCTATTGAAAGAGTCTTGCCGACAAGAAGCTAGAAAATTACGCGCGCGCCTCACAGAAGAACGCGT
TGTTTTCGAAAGAGAAGAAGAAGCTGTTTCTGCTTTAGCTATAGAAGGCGATGGCTCAGAGCCTATTACAGCTGATGAAT
CATAG

Protein sequence :
MFEKFTNRAKQVIKLAKKEAQRLNHNYLGTEHILLGLLKLGQGVAVNVLRTLGVDFDTAKHEVERLIGYGPEIQVYGDPA
LTGRVKKSFESANEEAALLEHNYVGTEHLLLGILNQSDGVALQVLENLHVDPKEIRKEILKELETFNLQLPPSSSITPRN
TNSSSSSKSSSPLGGHTLGGDKPEKLSALKAYGYDLTEMFKESRLDPVIGRSAEVERLILILCRRRKNNPVLVGEAGVGK
TAIVEGLAQKIVSGEVPEALRKKRLITLDLALMIAGTKYRGQFEERIKAVMDEVRKHGNILLFIDELHTIVGAGAAEGAI
DASHILKPALARGEIQCIGATTLDEYRKHIEKDAALERRFQKIVVQPPSVDETVEILRGLKKKYEEHHNVFITDEALVAA
AKLSDQYVHGRFLPDKAIDLLDEAGARVRVNTMGQPSDLIRLEAEIEKTKQAKEQAIGTQEYEKAASLRDEEKKLREKLG
NMKQQWESNKEEHQVPVDEEAVAQVVSVQTGIPAARLTEAESEKLLTLETTLQKKVIGQSQAVASICRAIRRSRTGIKDP
NRPMGSFLFLGPTGVGKTLLAQQIAIEMFGGEDSLIQVDMSEYMEKFAATKMMGSPPGYVGHEEGGHLTEQVRRRPYCVV
LFDEIEKAHPDIMDLMLQILEQGRLTDSFGRKIDFRNTIIIMTSNLGADLIRKSGEIGFGLRSHMDYAVIKEKIDAAVKK
HLKPEFINRLDESVIFKPLEKEALSEIIHLEINKLGSRLQNYQMDLNIPDSVISFLVTKGHSPEMGARPLRRVVEQYLED
PLAEMLLKESCRQEARKLRARLTEERVVFEREEEAVSALAIEGDGSEPITADES

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 2e-169 54

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CTRC69_01490 YP_008351077.1 ATP-dependent Clp protease VFG0079 Protein 0.0 51
CTRC69_01490 YP_008351077.1 ATP-dependent Clp protease VFG0080 Protein 9e-141 50