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Name : lysS (CTRC122_04285) Accession : YP_008348595.1 Strain : Chlamydia trachomatis RC-J(s)/122 Genome accession: NC_021891 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : 6.1.1.6 Position : 935610 - 937190 bp Length : 1581 bp Strand : + Note : COG1190 Lysyl-tRNA synthetase (class II) DNA sequence : ATGTCTGTAGAAGTTGAATACTTGCAACACGAAGATTATTTGTATAGAACAAGCAAGCTAAAGGAAATCAGAGATTTGGG CATAAATCCTTACCCTTATCAATACACTGATTGTCTTGAAGTACAGGAAATTCGTAATCAGTTTGTAGATAACGAATTAG GAGATAGCGAAGCGGCTTTTCGTAAAGAGACACCTAAGGTGCGTTTTGCCGGACGACTTGTTCTTTTCCGTTCTATGGGG AAAAATTCTTTTGGGCAGATCCTCGATAATGATGCAAAGATTCAAGTGATGTTTAATCGAGATTTTTCTGCAGTGGCAGG GTTAGCCGCGGATGCTGGGATTTCTCCGATTAAATTTATTGAGAAGAAACTTGATCTAGGAGACATCTTGGGTCTCGAAG GGTATCTTTTCTTTACTCACTCAGGAGAATTAACGGTTCTCGTTGAAACGGTAACGTTGTTATGTAAATCCTTAATTTCT TTGCCTGATAAGCATGCAGGATTAGCAGATAAAGAAATTCGCTATCGCAAACGTTGGGCAGATCTGATTTCCTCAGAGGA TGTGCGTAAGACTTTCTTAACAAGAAGCCGGATTCTTAAGTTGATTCGTGAGTACATGGATCAGCAGAGCTTTTTAGAGG TGGAAACTCCTATCCTGCAAACCATCTACGGAGGAGCAGAAGCAACTCCTTTTGTTACCACGCTGCAAGCGCTACATGCA GAAATGTTCCTAAGAATTTCTCTAGAGATTGCTTTGAAAAAACTCCTTGTTGGAGGAATGTCCCGAGTTTATGAAATCGG CAAAGTTTTCCGTAACGAAGGAATCGATAGAACGCATAATCCAGAGTTTACCATGATAGAGGCTTATGCGGCTTATTGGG ATTACAATGATGTAATGAAATGTGTGGAAAACCTTATTGAGTATATCGTACGTGCTTTGAATAACGGGGAAACTCAGGTT CAGTATTCACATTTAAAATCAGGACCTCAGGTTGTTGATTTTAAAGCTCCATGGATCCGTATGACGATGAAAGAAAGTAT CTCTGTCTATGGCGGCGTCGATGTAGACTTACATGCAGATCATGAATTACGTAAAATTTTAGAAACACAAACATCTCTTC CAGAGAAAACGTATGTTCATGCCTCACGAGGAGAGCTGATCGCTTTGCTATTTGATGAGCTGGTTTGTGATAAGCTCATC GCTCCGCATCACATTACAGATCATCCATTAGAAACAACGCCACTTTGTAAAACATTGCGTTCTGGGGATGAAACTCTGGT AGAACGATTTGAGAGTTTTTGTTTAGGAAAAGAGTTGTGTAATGCTTATTCGGAACTCAATGATCCTTTACAACAACGAA AATTGTTGGAAGAGCAAATGCGTAAAAAGGCTTTAAATCCTGACAGCGAATACCATCCTATAGATGAAGAATTTCTAGAA GCTCTTTGCCAAGGAATGCCTCCTGCAGGAGGATTTGGAATAGGTATCGATCGATTGGTTATGATGTTGACAGACGCCGC ATCCATTCGGGATGTCCTGTTTTTCCCTGTTATGCGGCGTATAGAAGCAAAAAAAGATTAA Protein sequence : MSVEVEYLQHEDYLYRTSKLKEIRDLGINPYPYQYTDCLEVQEIRNQFVDNELGDSEAAFRKETPKVRFAGRLVLFRSMG KNSFGQILDNDAKIQVMFNRDFSAVAGLAADAGISPIKFIEKKLDLGDILGLEGYLFFTHSGELTVLVETVTLLCKSLIS LPDKHAGLADKEIRYRKRWADLISSEDVRKTFLTRSRILKLIREYMDQQSFLEVETPILQTIYGGAEATPFVTTLQALHA EMFLRISLEIALKKLLVGGMSRVYEIGKVFRNEGIDRTHNPEFTMIEAYAAYWDYNDVMKCVENLIEYIVRALNNGETQV QYSHLKSGPQVVDFKAPWIRMTMKESISVYGGVDVDLHADHELRKILETQTSLPEKTYVHASRGELIALLFDELVCDKLI APHHITDHPLETTPLCKTLRSGDETLVERFESFCLGKELCNAYSELNDPLQQRKLLEEQMRKKALNPDSEYHPIDEEFLE ALCQGMPPAGGFGIGIDRLVMMLTDAASIRDVLFFPVMRRIEAKKD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 1e-69 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_008348595.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 9e-70 | 41 |
