|
Name : CTRC122_04035 (CTRC122_04035) Accession : YP_008348545.1 Strain : Chlamydia trachomatis RC-J(s)/122 Genome accession: NC_021891 Putative virulence/resistance : Resistance Product : tetracycline resistance structural protein TetA Function : - COG functional category : - COG ID : - EC number : - Position : 872499 - 873689 bp Length : 1191 bp Strand : - Note : COG0477 Permeases of the major facilitator superfamily DNA sequence : ATGAAATCTAACAATGCGCTCATCGTCATCCTCGCCACCGTCACCCTGGATGCTGTAGGCATAGGCTTGGTTATGCCGGT ACTGCCGGGCCTCTTGCGGGATATCGTCCATTCCGACAGCATCGCCAGTCACTATGGCGTGCTGCTAGCGCTATATGCGT TGATGCAATTTCTATGCGCACCCGTTCTCGGAGCACTGTCCGACCGCTTTGGCCGCCGCCCAGTCCTGCTCGCTTCGCTA CTTGGAGCCACTATCGACTACGCGATCATGGCGACCACACCCGTCCTGTGGATCCTCTACGCCGGACGCATCGTGGCCGG CATCACCGGCGCCACAGGTGCGGTTGCTGGCGCCTATATCGCCGACATCACCGATGGGGAAGATCGGGCTCGCCACTTCG GGCTCATGAGCGCTTGTTTCGGCGTGGGTATGGTGGCAGGCCCCGTGGCCGGGGGACTGTTGGGCGCCATCTCCTTGCAT GCACCATTCCTTGCGGCGGCGGTGCTCAACGGCCTCAACCTACTACTGGGCTGCTTCCTAATGCAGGAGTCGCATAAGGG AGAGCGTCGACCGATGCCCTTGAGAGCCTTCAACCCAGTCAGCTCCTTCCGGTGGGCGCGGGGCATGACTATCGTCGCCG CACTTATGACTGTCTTCTTTATCATGCAACTCGTAGGACAGGTGCCGGCAGCGCTCTGGGTCATTTTCGGCGAGGACCGC TTTCGCTGGAGCGCGACGATGATCGGCCTGTCGCTTGCGGTATTCGGAATCTTGCACGCCCTCGCTCAAGCCTTCGTCAC TGGTCCCGCCACCAAACGTTTCGGCGAGAAGCAGGCCATTATCGCCGGCATGGCGGCCGACGCGCTGGGCTACGTCTTGC TGGCGTTCGCGACGCGAGGCTGGATGGCCTTCCCCATTATGATTCTTCTCGCTTCCAGCGGCATCGGGATGCCCGCGTTG CAGGCCATGCTGTCCAGGCAGGTAGATGACGAGCATCAGGGACAGCTTCAAGGATCGCTCGCGGCTCTTACCAGCCTAAC TTCGATCATTGGACCGCTGATCTTCACGGCGATTTATGCCGCCTCGGCGAGCACATGGAACGGGTTGGCATGGATTGTAG GCGCCGCCCTATACCTTGTCTGCCTCCCCGCGTTGCGTCGCGGTGCATGGAGCCGGGCCACCTCGACCTGA Protein sequence : MKSNNALIVILATVTLDAVGIGLVMPVLPGLLRDIVHSDSIASHYGVLLALYALMQFLCAPVLGALSDRFGRRPVLLASL LGATIDYAIMATTPVLWILYAGRIVAGITGATGAVAGAYIADITDGEDRARHFGLMSACFGVGMVAGPVAGGLLGAISLH APFLAAAVLNGLNLLLGCFLMQESHKGERRPMPLRAFNPVSSFRWARGMTIVAALMTVFFIMQLVGQVPAALWVIFGEDR FRWSATMIGLSLAVFGILHALAQAFVTGPATKRFGEKQAIIAGMAADALGYVLLAFATRGWMAFPIMILLASSGIGMPAL QAMLSRQVDDEHQGQLQGSLAALTSLTSIIGPLIFTAIYAASASTWNGLAWIVGAALYLVCLPALRRGAWSRATST |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tetA(A) | AGK07027.1 | TetA(A) | Not tested | SGI1 | Protein | 3e-124 | 80 |
| tetA(A) | AGK07085.1 | TetA(A) | Not tested | SGI1 | Protein | 3e-124 | 80 |
| tetA | YP_006098396.1 | tetracycline resistance protein | Not tested | Tn2411 | Protein | 4e-124 | 80 |
| tetA(A) | ACK44537.1 | TetA(A) | Not tested | SGI1 | Protein | 3e-124 | 80 |
| tetA(A) | ACN81011.1 | TetA(A) | Not tested | AbaR5 | Protein | 5e-124 | 80 |
| tetA | CAJ77066.1 | Tetracycline resistance protein | Not tested | AbaR1 | Protein | 4e-124 | 80 |
| tet(G) | AAK02051.1 | tetracycline resistance protein | Not tested | SGI1 | Protein | 6e-91 | 61 |
| tetA(G) | ABZ01843.1 | TetA(G) | Not tested | SGI2 | Protein | 6e-91 | 61 |
| tetA(G) | AGK06974.1 | TetA(G) | Not tested | SGI1 | Protein | 6e-91 | 61 |
| tetA(G) | AGK07104.1 | TetA(G) | Not tested | SGI1 | Protein | 6e-91 | 61 |
| tetA | CAJ77034.1 | Tetracycline resistance protein | Not tested | AbaR1 | Protein | 3e-93 | 60 |
| tetA | YP_005797160.1 | tetracycline resistance protein, class G (TETA(G)) | Not tested | AbaR4e | Protein | 1e-66 | 49 |
| tet(H) | YP_005176248.1 | tetracycline efflux protein, class H | Not tested | ICEPmu1 | Protein | 3e-64 | 49 |
| tetB | AEA34667.1 | tetracycline resistance determinant | Not tested | Not named | Protein | 2e-67 | 48 |
| tetA(B) | AEZ06045.1 | tetracycline efflux protein | Not tested | Tn6167 | Protein | 3e-67 | 48 |
| tetA(B) | AAL08445.1 | tetracycline resistance protein TetA(B) | Not tested | SRL | Protein | 2e-67 | 48 |
| BJAB07104_00277 | YP_008207742.1 | Permeases of the major facilitator superfamily | Not tested | AbaR25 | Protein | 5e-67 | 48 |
| BJAB0868_00281 | YP_008211607.1 | Permeases of the major facilitator superfamily | Not tested | AbaR26 | Protein | 5e-67 | 48 |
| tetA(B) | AEQ20905.1 | tetracycline resistance protein | Not tested | Tn6166 | Protein | 5e-67 | 48 |
| ABZJ_00260 | YP_005524216.1 | Tetracycline resistance protein, class B (TETA(B) ) (Metal-tetracycline/H(+) antiporter) | Not tested | AbaR22 | Protein | 5e-67 | 48 |
| tetA(B) | AFH57202.1 | tetracycline resistance protein | Not tested | AbaR4a | Protein | 3e-67 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| CTRC122_04035 | YP_008348545.1 | tetracycline resistance structural protein TetA | Y19114.gene.p01 | Protein | 1e-144 | 99 |
| CTRC122_04035 | YP_008348545.1 | tetracycline resistance structural protein TetA | NC_011586.7045189.p0 | Protein | 1e-115 | 81 |
| CTRC122_04035 | YP_008348545.1 | tetracycline resistance structural protein TetA | X75761.gene.p01 | Protein | 7e-124 | 80 |
| CTRC122_04035 | YP_008348545.1 | tetracycline resistance structural protein TetA | NC_010410.6002597.p0 | Protein | 2e-124 | 80 |
| CTRC122_04035 | YP_008348545.1 | tetracycline resistance structural protein TetA | CP001485.1.gene2821. | Protein | 2e-124 | 80 |
| CTRC122_04035 | YP_008348545.1 | tetracycline resistance structural protein TetA | AF534183.gene.p01 | Protein | 7e-125 | 79 |
| CTRC122_04035 | YP_008348545.1 | tetracycline resistance structural protein TetA | NC_010410.6002612.p0 | Protein | 2e-93 | 60 |
| CTRC122_04035 | YP_008348545.1 | tetracycline resistance structural protein TetA | AF133140.gene.p01 | Protein | 2e-93 | 60 |
| CTRC122_04035 | YP_008348545.1 | tetracycline resistance structural protein TetA | AF133139.gene.p01 | Protein | 1e-94 | 59 |
| CTRC122_04035 | YP_008348545.1 | tetracycline resistance structural protein TetA | AY264780.2.gene3.p01 | Protein | 6e-77 | 54 |
| CTRC122_04035 | YP_008348545.1 | tetracycline resistance structural protein TetA | AF070999.gene.p01 | Protein | 2e-81 | 54 |
| CTRC122_04035 | YP_008348545.1 | tetracycline resistance structural protein TetA | Y19116.gene.p01 | Protein | 1e-72 | 53 |
| CTRC122_04035 | YP_008348545.1 | tetracycline resistance structural protein TetA | L06940.gene.p01 | Protein | 6e-74 | 53 |
| CTRC122_04035 | YP_008348545.1 | tetracycline resistance structural protein TetA | AY743590.gene.p01 | Protein | 3e-70 | 50 |
| CTRC122_04035 | YP_008348545.1 | tetracycline resistance structural protein TetA | Y15510.gene.p01 | Protein | 4e-65 | 50 |
| CTRC122_04035 | YP_008348545.1 | tetracycline resistance structural protein TetA | AJ420072.gene.p01 | Protein | 3e-63 | 49 |
| CTRC122_04035 | YP_008348545.1 | tetracycline resistance structural protein TetA | AF121000.gene.p01 | Protein | 4e-64 | 48 |
| CTRC122_04035 | YP_008348545.1 | tetracycline resistance structural protein TetA | V00611.gene.p01 | Protein | 4e-67 | 48 |
| CTRC122_04035 | YP_008348545.1 | tetracycline resistance structural protein TetA | NC_010558.1.6275971. | Protein | 1e-67 | 48 |
| CTRC122_04035 | YP_008348545.1 | tetracycline resistance structural protein TetA | CP004022.1.gene2534. | Protein | 3e-66 | 48 |
| CTRC122_04035 | YP_008348545.1 | tetracycline resistance structural protein TetA | AF038993.gene.p01 | Protein | 2e-66 | 48 |
| CTRC122_04035 | YP_008348545.1 | tetracycline resistance structural protein TetA | AF090987.gene.p01 | Protein | 2e-63 | 48 |
| CTRC122_04035 | YP_008348545.1 | tetracycline resistance structural protein TetA | L06798.gene.p01 | Protein | 2e-62 | 47 |
| CTRC122_04035 | YP_008348545.1 | tetracycline resistance structural protein TetA | AB084246.gene.p01 | Protein | 1e-67 | 47 |
| CTRC122_04035 | YP_008348545.1 | tetracycline resistance structural protein TetA | AJ250203.gene.p01 | Protein | 2e-57 | 45 |
| CTRC122_04035 | YP_008348545.1 | tetracycline resistance structural protein TetA | NC_011586.7043399.p0 | Protein | 1e-49 | 44 |
| CTRC122_04035 | YP_008348545.1 | tetracycline resistance structural protein TetA | NC_011595.7059241.p0 | Protein | 3e-49 | 44 |
| CTRC122_04035 | YP_008348545.1 | tetracycline resistance structural protein TetA | NC_010410.6003291.p0 | Protein | 2e-49 | 44 |
| CTRC122_04035 | YP_008348545.1 | tetracycline resistance structural protein TetA | NC_009085.4918440.p0 | Protein | 4e-45 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| CTRC122_04035 | YP_008348545.1 | tetracycline resistance structural protein TetA | VFG1036 | Protein | 1e-67 | 48 |
