|
Name : CTRC953_03000 (CTRC953_03000) Accession : YP_008346483.1 Strain : Chlamydia trachomatis RC-J/953 Genome accession: NC_021889 Putative virulence/resistance : Virulence Product : general secretion pathway protein E Function : - COG functional category : - COG ID : - EC number : - Position : 636774 - 638279 bp Length : 1506 bp Strand : - Note : COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB DNA sequence : ATGATGGACGGGAATAAAGGCACTATGCAAGATCTGTTAGATCAGCTTCCCTACTCTTTTTTAAAGAAAAATTATTTGCT GCCTGTAGAGGATTTAGGCGACAAGATCGTTTTTGCAAGGCATTTGAAAAAAACTCCTTTGGAGGCTTTGGATGAGGTGC GGTTGATCACGCAAAAACCTCTTTCATTGGTTTCTAAGGAAGAAGCAGAAATTATTCATGGATTGCAAAAGCTATATAGC GATAAGGACGGGAAAGCTTCCGAGATGCTACAGTCTATGCAGGAAGCTGTAGTGCCTGAATCGGAAAGCGATACCACAGA ACTTCTTGAGAATCAAGAGAACAGTGCTCCTGTAGTGCGGTTACTCAATCTGATTCTTAAGGAAGCTATTGAAGAGCGAG CCTCGGATATTCATTTTGACCCTGTGGAAGATCTTTTACGTATTCGTTACCGCATAGACGGTGTTCTACACGATCGCCAC GCTCCCCCGAACCATTTACGAGCCGCTCTTATTACTCGTATTAAAGTGCTTACCAAACTCGATATCGCCGAACACCGACT GCCTCAAGATGGTCGCATTAAGTTGCAACTAGGAGGACAAGAGATCGATATGCGTGTCAGTACGGTCCCTGTCATTCATG GAGAGCGGGTGGTGTTGCGCATACTGGATAAGCGCAATGTAATTTTAGATATACGCGGCTTGTGTATGCCTCCTAAAATG GAGACCTCCTTTAGAAAAGCGATAGGAGTTCCGGAAGGGATTCTATTAGTAACAGGTCCGACAGGAAGTGGGAAGACGAC CACTTTATATAGTGTCATACAACACCTTTCAGGTCCTTTTACTAATATCATGACCATAGAAGATCCTCCAGAGTATAAAC TCCCCGGTGTCGCTCAAATTGCTGTGAAACCTAAAATAGGACTAACCTTTTCTAAAGGACTTCGCCATTTGTTAAGACAA GATCCAGACGTTTTGATGGTAGGAGAAATCCGGGATCAAGAGACTGCGGAGATTGCCATTCAAGCGGCATTGACGGGGCA CTTGGTAGTGTCTACTCTTCATACGAATGATGCTGTTTCTGCAATCCCGCGTCTTTTAGACATGGGAGTAGAGCCTTATT TATTATCCGCAACAATGATAGGGGCTGTCGCTCAACGACTCGTCCGTAGAATTTGTACGCATTGCAAAGAATTCTGTGTG GCCGATGTGCAAGAACAGGCTTTATTAAGAGCTCTAGGGAAGGATCCTTTCGCTCCTTTATGTAAAGGACGTGGATGTTC ACAGTGCTTCCGTTCCGGATACAAAGGAAGACAAGGGATCTATGAGTTTGTCGATGTAACCACAACACTCCGTTCTGAAA TTGCTTTAGGGAGACCTTACCACATTTTACGAGGTGTTGCGGAGCGAGAAGGGTATTGCCCTCTGCTAGAGCATGGAGTA GAACTGGCTCTTGCTGGGGAGACAACCCTTTCCGAAGTTTTGCGTGTGGCAAAACGGTCAGAATAG Protein sequence : MMDGNKGTMQDLLDQLPYSFLKKNYLLPVEDLGDKIVFARHLKKTPLEALDEVRLITQKPLSLVSKEEAEIIHGLQKLYS DKDGKASEMLQSMQEAVVPESESDTTELLENQENSAPVVRLLNLILKEAIEERASDIHFDPVEDLLRIRYRIDGVLHDRH APPNHLRAALITRIKVLTKLDIAEHRLPQDGRIKLQLGGQEIDMRVSTVPVIHGERVVLRILDKRNVILDIRGLCMPPKM ETSFRKAIGVPEGILLVTGPTGSGKTTTLYSVIQHLSGPFTNIMTIEDPPEYKLPGVAQIAVKPKIGLTFSKGLRHLLRQ DPDVLMVGEIRDQETAEIAIQAALTGHLVVSTLHTNDAVSAIPRLLDMGVEPYLLSATMIGAVAQRLVRRICTHCKEFCV ADVQEQALLRALGKDPFAPLCKGRGCSQCFRSGYKGRQGIYEFVDVTTTLRSEIALGRPYHILRGVAEREGYCPLLEHGV ELALAGETTLSEVLRVAKRSE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 1e-94 | 44 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 8e-95 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| CTRC953_03000 | YP_008346483.1 | general secretion pathway protein E | VFG0182 | Protein | 8e-94 | 48 |
| CTRC953_03000 | YP_008346483.1 | general secretion pathway protein E | VFG1876 | Protein | 3e-97 | 46 |
| CTRC953_03000 | YP_008346483.1 | general secretion pathway protein E | VFG2048 | Protein | 4e-95 | 45 |
| CTRC953_03000 | YP_008346483.1 | general secretion pathway protein E | VFG1880 | Protein | 8e-77 | 44 |
| CTRC953_03000 | YP_008346483.1 | general secretion pathway protein E | VFG0233 | Protein | 7e-70 | 44 |
| CTRC953_03000 | YP_008346483.1 | general secretion pathway protein E | VFG0112 | Protein | 7e-77 | 41 |
