Gene Information

Name : CTRC852_04135 (CTRC852_04135)
Accession : YP_008345740.1
Strain : Chlamydia trachomatis RC-F(s)/852
Genome accession: NC_021888
Putative virulence/resistance : Virulence
Product : tetracycline resistance regulatory protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 895754 - 896389 bp
Length : 636 bp
Strand : +
Note : COG1309 Transcriptional regulator

DNA sequence :
ATGAACAAGCTCCAACGCGAGGCCGTGATCCGAACCGCGCTCGAACTGCTTAACGACGTGGGCATGGAAGGTCTAACGAC
GCGCCGACTGGCTGAGCGCCTCGGGGTGCAACAGCCAGCGCTCTACTGGCATTTCAAGAACAAGCGTGCGTTGCTCGACG
CACTTGCCGAAGCCATGCTGACGATAAATCACACGCATTCGACGCCAAGGGATGACGACGACTGGCGTTCGTTCCTGAAG
GGCAATGCATGCAGTTTTCGACGGGCGTTGCTCGCTTATCGCGATGGCGCGCGTATTCATGCCGGGACGCGGCCAGCCGC
GCCGCAGATGGAAAAAGCCGACGCGCAGCTTCGCTTCCTTTGCGATGCTGGCTTTTCGGCAGGTGACGCGACCTATGCGT
TGATGGCAATCAGCTACTTCACCGTCGGCGCTGTTCTTGAGCAGCAAGCTAGCGAGGCAGACGCCGAGGAGCGGGGCGAA
GATCAGTTGACCACCTCAGCGTCTACGATGCCGGCGCGCCTACAGAGCGCGATGAAAATCGTCTACGAAGGCGGTCCGGA
CGCGGCATTCGAGCGAGGCCTGGCTCTCATCATCGGCGGTCTTGAACGGAGTGCTTGCGCAATCTCGCTCCTTTAG

Protein sequence :
MNKLQREAVIRTALELLNDVGMEGLTTRRLAERLGVQQPALYWHFKNKRALLDALAEAMLTINHTHSTPRDDDDWRSFLK
GNACSFRRALLAYRDGARIHAGTRPAAPQMEKADAQLRFLCDAGFSAGDATYALMAISYFTVGAVLEQQASEADAEERGE
DQLTTSASTMPARLQSAMKIVYEGGPDAAFERGLALIIGGLERSACAISLL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tetR(A) ACK44536.1 TetR(A) Not tested SGI1 Protein 9e-69 73
tetR(A) AGK07026.1 TetR(A) Not tested SGI1 Protein 9e-69 73
tetR(A) AGK07084.1 TetR(A) Not tested SGI1 Protein 9e-69 73
tetR YP_006098395.1 tetracycline repressor Not tested Tn2411 Protein 1e-68 73
tetR(A) ACN81010.1 repressor protein Not tested AbaR5 Protein 9e-69 73
tetR CAJ77065.1 Tetracycline repressor protein Not tested AbaR1 Protein 6e-69 73
tetR CAJ77033.1 Tetracycline repressor protein Not tested AbaR1 Protein 8e-52 59
tetR(G) AGK06973.1 TetR(G) Not tested SGI1 Protein 8e-52 59
tetR(G) AGK07103.1 TetR(G) Not tested SGI1 Protein 8e-52 59
tetR AAK02050.1 tetracycline resistance regulator protein Not tested SGI1 Protein 8e-52 59
tetR ABZ01841.1 TetR Not tested SGI2 Protein 8e-52 59
BJAB0868_00282 YP_008211608.1 Transcriptional regulator Not tested AbaR26 Protein 2e-48 53
tetR AEA34668.1 tetracycline repressor protein Not tested Not named Protein 1e-48 53
BJAB07104_00278 YP_008207743.1 Transcriptional regulator Not tested AbaR25 Protein 2e-48 53
tetR AAL08444.1 tet repressor Not tested SRL Protein 4e-48 53
ABZJ_00261 YP_005524217.1 tetracycline repressor protein TetR Not tested AbaR22 Protein 1e-48 53
tetR YP_005797161.1 tetracycline repressor protein class G Not tested AbaR4e Protein 1e-48 53
tetR AFH57203.1 repression protein Not tested AbaR4a Protein 1e-48 53
tetR(B) AEQ20906.1 tetracycline repressor protein Not tested Tn6166 Protein 1e-48 53
tetR AFV47970.1 repressor protein TetR Not tested AbaR25 Protein 1e-48 53
tetR(B) AEZ06046.1 repressor protein Not tested Tn6167 Protein 1e-48 53
tetR AFV47998.1 repressor protein TetR Not tested delta-AbaR25 Protein 1e-48 53
tetR1 YP_005176239.1 tetracycline repressor protein Not tested ICEPmu1 Protein 2e-50 53
tetR2 YP_005176247.1 tetracycline repressor protein Not tested ICEPmu1 Protein 2e-50 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CTRC852_04135 YP_008345740.1 tetracycline resistance regulatory protein VFG1035 Protein 2e-48 53