Gene Information

Name : smpB (SSDC_01375)
Accession : YP_008343908.1
Strain : Candidatus Profftella armatura DC
Genome accession: NC_021885
Putative virulence/resistance : Unknown
Product : SsrA-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 343503 - 343964 bp
Length : 462 bp
Strand : -
Note : COG0691 tmRNA-binding protein

DNA sequence :
ATGATAATTACAAATAATAAAAAAGCATTATTTAATTATTTTCTAGAAGATTATTATGAAGCTGGCATTGTCCTAAAAGG
ATGGGAAGTTAAATCAATACGGGCAAAACATGTTCATTTAAAAGAATCATATATCATTATTCGTGATAATGAAATATTTT
TGTTAGGCGCACATATTAGTATTTTATCTAATTTAAATGTTTTTACAGATATTAGTTATGACACAATTAGAACACGAAAA
TTATTATTGCATGCAACTGAAATTAAAAAATTAACTGGAAAGGTTAAAAAATCTGGATACACTTTAATTCCATCTAAATT
ATATTTTGTAAAAAATAGAATAAAATGCGAAATAGCTCTTGCTAAAGGAAAAAAACAATATGATAAACGTCGAAAAGAAC
GCGAACGTGATATAAAAAGAGAAACAGAAATAATTATAAAAAAATATAAAAATCAATTTTAA

Protein sequence :
MIITNNKKALFNYFLEDYYEAGIVLKGWEVKSIRAKHVHLKESYIIIRDNEIFLLGAHISILSNLNVFTDISYDTIRTRK
LLLHATEIKKLTGKVKKSGYTLIPSKLYFVKNRIKCEIALAKGKKQYDKRRKERERDIKRETEIIIKKYKNQF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AET14351.1 SsrA-binding protein Not tested SaPI68111 Protein 4e-17 41
smpB NP_230495.1 SsrA-binding protein Not tested VPI-1 Protein 2e-18 41