Gene Information

Name : hslU (SSDC_00830)
Accession : YP_008343801.1
Strain : Candidatus Profftella armatura DC
Genome accession: NC_021885
Putative virulence/resistance : Unknown
Product : ATP-dependent protease ATP-binding subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 196078 - 197406 bp
Length : 1329 bp
Strand : -
Note : COG1220 ATP-dependent protease HslVU (ClpYQ), ATPase subunit

DNA sequence :
ATGAACATGACCCCGAAAGAAATTGTTTCTGAACTTGATAAATACGTAATTGGTCAAAATCGCGCGAAAAGAGCAGTAGC
AATTGCATTACGTAATCGTTGGAGACGTCAACAAATTACTGGGCCATTGCAACAAGAAATTACGCCTAAAAATATTTTAA
TGATTGGTCCTACTGGAGTTGGGAAAACAGAAATTGCGCGTAGATTAGCAAAATTATCTAATGCACCATTTATTAAAATT
GAAGCAACTAAATTTACTGAGGTTGGTTATGTGGGTCGTGATGTAGATACCATTATTCGTGATTTAATAGATATTAGTAT
TAAACAAACCAGAGAATTTGAAATAAATAAGGTTCGAACTCGTGCTGAAGATGCAGCAGAAGATCGTGTGATTGATATTT
TAGTACCATCTAAAGAAAAATCTAATTTAGACACAGATTTTAATAATGAAAATAATAATATTTCTACACGACAAATTTTT
CGAAAACGTTTACGAGAAGGCGCCTTAGATAATAAAGAAATTGAAATTGAGTTAAATGATACAGGACCTCACATGGAAAT
TATGTCTCCACCTGGGATGGAGGAAATGACCGCTCAAATAAAAACTATGTTTTCTGTAATAGGAAATCATAGAAAAAAAA
CTCGTAAAATAAAAATACGAGAAGCTATAAAACTTTTAATTGATGAAGAAGCTAATAAATTATTAAATGAAGACGAAATA
CAACAAAAAGCAATTAATAATGTTGAACAAAATGGAATAATTTTTTTAGATGAAATTGATAAAATAACAACTCGTTCTTC
TCAAAACAATAATACTGATATTTCTAGAGCGGGCGTGCAACGTGATTTACTTCCATTAGTTGAAGGAACAACAGTAAACA
CTAAATATGGAATAATTAAAACAGATCATATTCTTTTTATTGCTTCTGGTGCATTTCATTTAGCAAAACCTTCTGATTTA
ATTCCTGAATTACAAGGACGATTTCCAATTAGAGTTGAATTAGATTCTTTATCCATATCAGATTTTACTCGTATTATGAC
ATCAACAAACGTTTGTTTAACGAAACAATATGAAGCACTTTTAGCTACTGAAGGAATAAAAATTGAATTTGTTGACGATG
GTATTCAAAGGCTCGCTGAAATTGCTTATTGTATTAATGAAAGGACTGAAAATATAGGTGCACGTCGATTATATACAGCT
ATGGAAAAATTATTAGAAGAAGTTTCATTTAATAGTAATAATATATCATTATTAGTTGATGCGGATTATGTTAATTCCCG
ATTAGGAGATTTATCTATAAATGAAGATTTGTCACGGTATGTATTATAA

Protein sequence :
MNMTPKEIVSELDKYVIGQNRAKRAVAIALRNRWRRQQITGPLQQEITPKNILMIGPTGVGKTEIARRLAKLSNAPFIKI
EATKFTEVGYVGRDVDTIIRDLIDISIKQTREFEINKVRTRAEDAAEDRVIDILVPSKEKSNLDTDFNNENNNISTRQIF
RKRLREGALDNKEIEIELNDTGPHMEIMSPPGMEEMTAQIKTMFSVIGNHRKKTRKIKIREAIKLLIDEEANKLLNEDEI
QQKAINNVEQNGIIFLDEIDKITTRSSQNNNTDISRAGVQRDLLPLVEGTTVNTKYGIIKTDHILFIASGAFHLAKPSDL
IPELQGRFPIRVELDSLSISDFTRIMTSTNVCLTKQYEALLATEGIKIEFVDDGIQRLAEIAYCINERTENIGARRLYTA
MEKLLEEVSFNSNNISLLVDADYVNSRLGDLSINEDLSRYVL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hslU YP_003728753.1 heat shock protein HslU Not tested cag PAI Protein 7e-97 46