Gene Information

Name : kdpB (BDL_856)
Accession : YP_008341019.1
Strain :
Genome accession: NC_021884
Putative virulence/resistance : Unknown
Product : K+-transporting ATPase, B subunit
Function : -
COG functional category : -
COG ID : -
EC number : 3.6.3.12
Position : 1052365 - 1054452 bp
Length : 2088 bp
Strand : -
Note : kdpB: K+-transporting ATPase, B subunit

DNA sequence :
ATGACTCAACATTCCGCTACGCGATCGATGTTCGACCCGGCGCTCGTGCGCCCGGCGATCGTCGATTCGTTCAAGAAACT
CACGCCGCGCACGCAGTTGCGCAACCCGGTGATGTTCTGCGTGTACGTCGGCAGCATCCTGGCGACGATCCTTTGGATCG
CCGCGCTGACGGGGCAGGCCGAGGCGCCCGCGGGCTTCATTCTCGCGGTCGCGCTGTGGCTGTGGTTCACGGTGCTGTTC
GCGAACTTCGCCGAGGCGATCGCCGAGGGGCGCTCGAAGGCGCAGGCCGCGTCGCTTCGCAGCGCGAAGAAGGACGTGAT
GGCCAAGAAGCTCAACGAGCCGCATCCGAAGTCGCCCGTGCGCATCATGACGGCGTCCGATCTGCGCCGCGGCGACGTCG
TGCTCGTCGAGGCGGGCGATACGATTCCGGCCGACGGCGAGGTGATCGAGGGCGTCGCGTCGGTCGACGAATCGGCGATC
ACCGGCGAATCCGCACCGGTGATCCGCGAATCGGGCGGCGATTTTTCGTCGGTGACGGGCGGCACGCGCGTGCTGTCGGA
CTGGATCGTCGTCAAGGTGACGGCGAACCCCGGCGAGGCGTTCCTCGACCGGATGATCGCGATGGTCGAAGGCGCGAAGC
GCAAGAAGACGCCCAACGAGATCGCGCTCACGATCCTGCTCGTCGCGCTGACGATCGTGATGCTGCTCGCCACCGCGACG
CTGCTGCCGTTCTCGATGTTCTCGGTCGACGCGATGCACTCGGGCCACGTCGTGACGATCACCGCGCTCGTCGCGCTGCT
CGTGTGCCTGATCCCGACGACGATCGGCGGCCTGCTGTCCGCGATCGGCGTGGCCGGCATGAGCCGGATGATGCAGGCGA
ACGTGATCGCGACATCGGGCCGCGCGGTGGAGGCCGCGGGCGACGTCGACGTGCTGCTGCTCGACAAGACGGGCACGATC
ACGCTCGGCAACCGGCAGGCGTCGGCGTTCCTGCCCGCGCCCGAGGTGACCGAGGCGACGCTCGCCGACGCCGCGCAACT
GTCGTCGCTCGCCGACGAAACGCCGGAGGGCCGCAGCATCGTCGTGCTCGCGAAGGAGCGCTTCAACATTCGCCAGCGCG
ACATGGGCGCGCTGCACGCGGTGTTCCTGTCGTTCTCCGCGCACACGCGCATGAGCGGCGTCGACCTCTCGCCCGAGCGC
GAGATCAGAAAGGGCGCGGCCGACGCGGTGAAGAAGTACGTCGAGAGCCACGGCGGACGCTTTCCGGCCGAGGTGACGAA
CGCGGTGACGGACGTCGCGCGGCGCGGCAGCACGCCGCTCGTGGTCGCCGAGAAGCGGGGGGCGCTCGCGCGCGTGCTCG
GCGTGATCGAGCTGAAGGACATCGTGAAGGGCGGCATCAAGGAGCGTTTCGCGGAGCTGCGCAAGATGGGCATCAAGACC
GTGATGGTGACGGGCGACAACCGGCTCACGGCCGCGGCGATCGCGGCGGAAGCGGGCGTCGACGATTTCCTCGCGGAAGC
GACGCCCGAGACGAAGCTCTCGACGATTCGCGAGCACCAGGCGGCGGGCCGGCTCGTCGCGATGACGGGCGACGGCACCA
ACGACGCGCCGGCGCTCGCGCAGGCGGATGTGGCCGTCGCGATGAACACCGGCACGCAGGCCGCGAAGGAGGCGGGCAAC
ATGGTCGACCTCGATTCGAATCCGACCAAGCTGATCGAGATCGTCGAGATCGGCAAGCAGATGCTGATGACGCGCGGCTC
GCTCACGACGTTCTCGATCGCGAACGACATCGCGAAGTACTTCGCGATCATTCCGGCCGCGTTCGCGACCACCTATCCGC
AGCTGAACGCGCTGAACGTGATGCATCTGGCCACGCCCGCGTCCGCGATCATGTCGGCCGTGATCTTCAATGCGCTCATC
ATCGTGCTGCTGATTCCGCTCGCGCTCAAGGGCGTGAAGTATCGTCCGCTCGGCGCCGCGACGCTGCTGCGCCGCAATCT
GCTCGTCTACGGCCTGGGCGGCATTCTCGTGCCGTTCGTCGGCATCAAGCTGATCGACGTCGTGCTCGCCGCGCTCGGCT
GGGTTTAA

Protein sequence :
MTQHSATRSMFDPALVRPAIVDSFKKLTPRTQLRNPVMFCVYVGSILATILWIAALTGQAEAPAGFILAVALWLWFTVLF
ANFAEAIAEGRSKAQAASLRSAKKDVMAKKLNEPHPKSPVRIMTASDLRRGDVVLVEAGDTIPADGEVIEGVASVDESAI
TGESAPVIRESGGDFSSVTGGTRVLSDWIVVKVTANPGEAFLDRMIAMVEGAKRKKTPNEIALTILLVALTIVMLLATAT
LLPFSMFSVDAMHSGHVVTITALVALLVCLIPTTIGGLLSAIGVAGMSRMMQANVIATSGRAVEAAGDVDVLLLDKTGTI
TLGNRQASAFLPAPEVTEATLADAAQLSSLADETPEGRSIVVLAKERFNIRQRDMGALHAVFLSFSAHTRMSGVDLSPER
EIRKGAADAVKKYVESHGGRFPAEVTNAVTDVARRGSTPLVVAEKRGALARVLGVIELKDIVKGGIKERFAELRKMGIKT
VMVTGDNRLTAAAIAAEAGVDDFLAEATPETKLSTIREHQAAGRLVAMTGDGTNDAPALAQADVAVAMNTGTQAAKEAGN
MVDLDSNPTKLIEIVEIGKQMLMTRGSLTTFSIANDIAKYFAIIPAAFATTYPQLNALNVMHLATPASAIMSAVIFNALI
IVLLIPLALKGVKYRPLGAATLLRRNLLVYGLGGILVPFVGIKLIDVVLAALGWV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kdpB NP_814334.1 potassium-transporting ATPase subunit B Not tested Not named Protein 2e-165 64
ef0088 AAM75291.1 EF0088 Not tested Not named Protein 2e-165 64
kdpB BAA82181.1 potassium-transporting ATPase(B chanin) Not tested Type-II SCCmec Protein 2e-135 56
SAR0071 YP_039539.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 3e-135 56
kdpB(SCCmec) NP_370597.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 3e-135 56
kdpB NP_373310.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 3e-135 56
kdpB YP_190029.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 3e-135 56
kdpB YP_251949.1 potassium-transporting ATPase subunit B Not tested SCCmec Protein 4e-136 56