Gene Information

Name : cadA (BDL_2001)
Accession : YP_008342154.1
Strain :
Genome accession: NC_021884
Putative virulence/resistance : Resistance
Product : cadmium-translocating P-type ATPase
Function : -
COG functional category : -
COG ID : -
EC number : 3.6.3.3
Position : 2368449 - 2370938 bp
Length : 2490 bp
Strand : +
Note : ATPase-IB2_Cd: cadmium-translocating P-type ATPase

DNA sequence :
ATGACCGAGGCCACCCGGGCCGAAAACCGGCCGCGAACGCCAGAAGCCGATCGCGGCGGCGCGCAGTCGGGCGATGCGCG
CACATCGGCGCGCGCCGCTGGCTGCTGCTCGCACCATCACCCGCATGGCGAGGTCGAAACGCAGGCGAATCTCGCGGTTC
AGTCAAGCAATCGCGATTCGAGCGACCACGCACATGCACCCCATTCGCATGCGAACGGCGACCATCCGCACGACCACGAC
CACGACCACGACCACGACCACGACCACGACCACGACGGCGCGGCGTGCTACGCGCCCGCCCCCGTCGCGTTCGCGCCGTT
GCCCGGCGCGCGAAAGGCCGCCGGCGGCCGTGTGCGCTCGGCGTTCCGGATCATGCAGATGGACTGCCCGACCGAGGAGA
CACTGATCCGCAAGAAGCTGGGCGCGATGTCCGAAGTCGCGGCGCTCGAATTCAACCTGATGCAGCGGATGCTCGCGGTC
GAGCACGTGCCGGGCGCGGAAGCCGGCATCGCCGCCGCGATCCGCTCGCTCGGCATGACGCCCGAACAGGCGGACGCCGG
CGCGTCGGGCCGTGGCGCGTTGCCCGCGCCGGCCGACGCGCCGCGCCCGTGGTGGCCGCTCGCGGTCGCGGGCGTCGCGG
CGGCGGCGTCGGAAGCGGCCACGTGGCTGCAACTGCCGGTATGGCTCGCCGCCGCGCTCGCGCTCGCCGCGGTCGCGACC
TGCGGCCTCGGCACGTATCGCAAGGGCTGGATCGCGCTCACGAACGGCAACCTGAACATCAACGCGCTGATGAGCATCGC
GGTGACGGGCGCGATGGCGATTGGCCAGTGGCCCGAGGCCGCGATGGTGATGGTGCTCTTCACCGTCGCCGAATTGATCG
AGGCGCGCTCGCTCGACCGTGCGCGCAACGCGATCCAGAGCCTGATGCGCCTCGCGCCCGACACCGTGACGCTCAGGCAG
CCCGACGGCACGTGGCAGCCGGTCGACGCCGCGCAGGTCGCGCTCGGTGCGATCGTGCGCGTGAAGCCCGGCGAGCGCAT
CGGCCTCGACGGCGAGATCGTTGCCGGCCGCTCGACCGTCAACCAGGCGCCGATCACGGGCGAGAGCCTGCCCGTCGAGA
AAACCGAGGGCGACGCGGTGTACGCGGGCACGATCAACGAAGCCGGCTCGTTCGAATATCGGGTGACGGCGGTCGCGAGC
AACACGACGCTCGCGCGGATCATCCATGCGGTCGAGGAGGCGCAGGGTGCGAAGGCGCCGACGCAGCGCTTCGTCGACAG
CTTCGCGCGCGTCTACACGCCGATCGTGTTCGCGATCGCGCTCGTCGTCGCGATCGCGCCGCCGCTCGTGCTCGACGGCG
CATGGCGCGACTGGATCTATCGCGCGCTCGTGCTGCTCGTGATCGCGTGCCCATGCGCGCTCGTGATCTCGACGCCCGTG
ACGATCGTATCGGGGCTCGCGGCGGCCGCGCGGCGCGGGATTCTCGTGAAGGGCGGCGTGTACCTCGAGCAGGGGCGCCG
CCTCGCGTGGCTCGCGCTCGACAAGACGGGCACGATCACGCGCGGTAAGCCGGTGCAGACCGATTTCGAGATGCGCGCAG
CCGACGTCGACGCCGCGCTCGTGCGGGGGCTCGCCGCGCGCCTCGCCGCGCGCTCGGATCACCCGGTTTCGCAGGCGGTC
GCGGCGGCGAGCGCGGCTGCCGGCGCGGGCGGCGCCCCGCGCGCGAAGCCCGCGTCGTTCGCCGACGTCGCCGATTTCGA
GGCGATTCCCGGCCGCGGCGTGCGCGGCAAGATCGACGGCGTGCCGTACTGGCTCGGCAATCATCGCCTCGTCGAGGAGC
TCGACTGCTGCACGAGCGCGCTCGAAGCGCGTCTCGACGAGCTCGAGCGGCAGGGCAAGACGGTCGTGATGCTGATCGAC
GGCGCGCGCGTGCTCGGCCTCTTCGCGGTGGCCGACACGGTGAAGGACACGAGCCGCGCGGCGGTTGCCGAGCTGCACGC
GCTCGGCATCAAGACCGCGATGCTGACGGGCGACAACCCGCACACCGCGCAAGCGATCGCGCAGCAGGTCGGCATCGACG
ACGCGCGCGGCAACCAACTGCCGCAGGACAAGCTCGCCGCCGTCGAAGCGCTCGCGGCGGGCGGCCGCGCGGTCGGCATG
GTCGGCGACGGGATCAACGACGCGCCGGCGCTCGCGCGCGCCGACATCGGCTTCGCGATGGGCGCGATGGGCACCGATAC
CGCGATCGAGACGGCCGACGTCGCGCTGATGGACGACGACCTGCGCAAGATCCCGGCGTTCGTGCGGCTGTCGCGCGCGA
CGCATCGCGTGCTCGTGCAGAACATCGCGTTCGCGCTCGCCGTGAAGGCGGTGTTCGTCGGCCTCACGGTCGCGGGGATG
GGCACGATGTGGATGGCGGTGTTCGCCGACGCGGGCGCGAGCCTCATCGTCGTCGGCAACGGCTTGCGGCTGTTGCGCCG
CGGCCAATGA

Protein sequence :
MTEATRAENRPRTPEADRGGAQSGDARTSARAAGCCSHHHPHGEVETQANLAVQSSNRDSSDHAHAPHSHANGDHPHDHD
HDHDHDHDHDHDGAACYAPAPVAFAPLPGARKAAGGRVRSAFRIMQMDCPTEETLIRKKLGAMSEVAALEFNLMQRMLAV
EHVPGAEAGIAAAIRSLGMTPEQADAGASGRGALPAPADAPRPWWPLAVAGVAAAASEAATWLQLPVWLAAALALAAVAT
CGLGTYRKGWIALTNGNLNINALMSIAVTGAMAIGQWPEAAMVMVLFTVAELIEARSLDRARNAIQSLMRLAPDTVTLRQ
PDGTWQPVDAAQVALGAIVRVKPGERIGLDGEIVAGRSTVNQAPITGESLPVEKTEGDAVYAGTINEAGSFEYRVTAVAS
NTTLARIIHAVEEAQGAKAPTQRFVDSFARVYTPIVFAIALVVAIAPPLVLDGAWRDWIYRALVLLVIACPCALVISTPV
TIVSGLAAAARRGILVKGGVYLEQGRRLAWLALDKTGTITRGKPVQTDFEMRAADVDAALVRGLAARLAARSDHPVSQAV
AAASAAAGAGGAPRAKPASFADVADFEAIPGRGVRGKIDGVPYWLGNHRLVEELDCCTSALEARLDELERQGKTVVMLID
GARVLGLFAVADTVKDTSRAAVAELHALGIKTAMLTGDNPHTAQAIAQQVGIDDARGNQLPQDKLAAVEALAAGGRAVGM
VGDGINDAPALARADIGFAMGAMGTDTAIETADVALMDDDLRKIPAFVRLSRATHRVLVQNIAFALAVKAVFVGLTVAGM
GTMWMAVFADAGASLIVVGNGLRLLRRGQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cadA BAC57487.1 Probable cadmium-transporting ATPase (Cadmium efflux ATPase) Not tested Type-IIIinv SCCmec Protein 2e-110 46
unnamed BAB47609.1 cadmium resistance protein B Not tested Type-III SCCmec Protein 2e-110 46
SE0075 NP_763630.1 cadmium resistance protein B Not tested SCCpbp4 Protein 6e-110 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
cadA YP_008342154.1 cadmium-translocating P-type ATPase BAC0298 Protein 0.0 66