Gene Information

Name : BDL_187 (BDL_187)
Accession : YP_008340367.1
Strain :
Genome accession: NC_021884
Putative virulence/resistance : Unknown
Product : integrase core domain protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 213863 - 214483 bp
Length : 621 bp
Strand : -
Note : -

DNA sequence :
ATGCGTCAGGCTCGGCTGGTGCGGTCTAAGCGCGTACATCGTTATCGAGCGGCTCAGGCCGAGAGTCTGATTGCGCCGAA
TCTGCTTGCACGACGATTCGATCCGGCGCAGCGCGATCAGGTATGGGTGGGCGACATCACCTTTGTACAGACTAGGCAGG
GATGGCTCTACGTGGCCGTGGTCATGGATCTGTACGCGCGCCGCGTGGTGGGCTGGGCGTTTAGTCAGCACGCGGACACC
GACTTGGCACTAAAGGCATTAAGACGGGCTTACGATCATCGTCGTCCGCCACCAGGCCTGATGTTCCATTCGGATCAGGG
CTGCCAATACACGAGCACACGCTTTCTCGCCGAGCTGCGCGCCCGTGGCACGATCCAGAGCATGAGTCGGCGCGGCAACT
GTTGGGACAACGCGGTGGTCGAGCGCTTCTTCCGAAGTCTCGAAAATGAATGGATCGGCGACCAGTTGTACGTCGATCAC
CGCCATGCAGAGCAAGACATCACTGATTATCTAGTCGATTTTTACAACCATCGTCGCCTTCACTCGGCTGCGAAGGGACT
GCCGCCAGCGCGTTTCGAAGCGCTCGCAGCCTATCCCGGAGCAGTGTCCAAAGTTGCTTGA

Protein sequence :
MRQARLVRSKRVHRYRAAQAESLIAPNLLARRFDPAQRDQVWVGDITFVQTRQGWLYVAVVMDLYARRVVGWAFSQHADT
DLALKALRRAYDHRRPPPGLMFHSDQGCQYTSTRFLAELRARGTIQSMSRRGNCWDNAVVERFFRSLENEWIGDQLYVDH
RHAEQDITDYLVDFYNHRRLHSAAKGLPPARFEALAAYPGAVSKVA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAC31485.1 L0006 Not tested LEE Protein 4e-39 49
ECs4537 NP_312564.1 hypothetical protein Not tested LEE Protein 6e-39 49
unnamed CAI43898.1 putative transposase Not tested LEE Protein 1e-39 49
Z5089 NP_290241.1 transposase Not tested LEE Protein 6e-39 49
aec65 AAW51748.1 Aec65 Not tested AGI-3 Protein 1e-39 49
unnamed ACU09432.1 IS911 transposase orfB Not tested LEE Protein 4e-39 49
ECO111_3779 YP_003236114.1 putative IS602 transposase OrfB Not tested LEE Protein 1e-39 49
l7094 CAD33743.1 ORF B protein Not tested PAI I 536 Protein 2e-40 48
orfB CAE85178.1 OrfB protein, IS911 Not tested PAI V 536 Protein 2e-40 48
tnpB CAB61574.1 transposase B Not tested HPI Protein 2e-38 46
trp1329B CAB46576.1 IS1329 transposase B Not tested HPI Protein 7e-39 46
tnpA AAD44733.1 TnpA Not tested SHI-2 Protein 3e-24 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BDL_187 YP_008340367.1 integrase core domain protein VFG0785 Protein 2e-39 49
BDL_187 YP_008340367.1 integrase core domain protein VFG1484 Protein 1e-40 48