|
Name : N220_04980 (N220_04980) Accession : YP_008338454.1 Strain : Mannheimia haemolytica USMARC_2286 Genome accession: NC_021883 Putative virulence/resistance : Unknown Product : integrase Function : - COG functional category : - COG ID : - EC number : - Position : 971071 - 971847 bp Length : 777 bp Strand : + Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+. DNA sequence : GTGACTACTGATATGTTAATTGAATGGCGTAATCAAGTTGTTGGTAATACAATTAAAGCTGTGACGTGGAATAATTATGT GAGACACCTAAAAGCATTATATAATTTTGCGATAGCACAGGGGCTACTTTGCATGAGTAGTAATCCATTTAATCATTTAT TTATTAGAGAATCTAGAAGAAAAAAGAAAACTTATTCCAGTGAGCAGTTGCATAAAATCGATTATATTCTACATAATAAT ATCATCTTACCTAGTTTTTTAAAACCTAGCTGGTTTATTCTTGCTATCATTATGACATTGAGATGCACAGGAATTAGGAG AGGGCAATTGGTTAAACTGAAAATCGGTGATGTTAATTTATCAAATAGGACGATCTATATTTCACCAGAAATTAATAAAA ACCATGATTATCATATAGTACCGATATCCGATTCACTTTATCCCCATATAGAAAGGCTGATTCAGGAGTTAAAGATCCAT AAACAAACGGATGATTGCCAGTTATTTAACCTCAATTTATTTTCTCGTTATACTCGTAGGAAAGGTCAGCCGATGAGCCA AAACCAGCTTACTCATATATTTAGGCATATTTCCGATTTGGTTGGCTTCACGTCATCACCACATAGATTTCGGCATACAG TAGCTACTCAATTGATGAAGAAACCTGAAAATGTTTATGTAGTTAAGAAATTATTAGGTCATAAAGATATCAGCGTTACA TTAGGATATATTGAATACGATGTGGAAATGCTACGAGACACCGTGAACTTACTCTAA Protein sequence : MTTDMLIEWRNQVVGNTIKAVTWNNYVRHLKALYNFAIAQGLLCMSSNPFNHLFIRESRRKKKTYSSEQLHKIDYILHNN IILPSFLKPSWFILAIIMTLRCTGIRRGQLVKLKIGDVNLSNRTIYISPEINKNHDYHIVPISDSLYPHIERLIQELKIH KQTDDCQLFNLNLFSRYTRRKGQPMSQNQLTHIFRHISDLVGFTSSPHRFRHTVATQLMKKPENVYVVKKLLGHKDISVT LGYIEYDVEMLRDTVNLL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| Pmu_02880 | YP_005176187.1 | tyrosine recombinase-2 family protein | Not tested | ICEPmu1 | Protein | 8e-109 | 89 |
| Pmu_02700 | YP_005176176.1 | tyrosine recombinase-1 family protein | Not tested | ICEPmu1 | Protein | 2e-55 | 47 |
