Gene Information

Name : N220_03675 (N220_03675)
Accession : YP_008338194.1
Strain : Mannheimia haemolytica USMARC_2286
Genome accession: NC_021883
Putative virulence/resistance : Virulence
Product : Tetrathionate response regulatory protein TtrR
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 722657 - 723304 bp
Length : 648 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence : 
ATGATTATTCACATTCTTGATGACGAAGAAAGCATTTTAGACGCTATGTCGTTCCTGCTTGCCCCGCTTGGGGTGGAAAT
CCAAACGTGGCAATCCAGCCTAGATTTTTTGGCACAGGCGGATTTACACCGGCAAGGCGTGCTGTTACTAGATATTCGAA
TGCCGCTGCCAGACGGGCAACAGGTTCATCAACAACTGCGAGAGGCACAATCGACCCTGGCGGTGGTGATTATGACCGCC
CACGGTGATGTGCCGATGGCAGTCGCTGAATTGAAAAAAGGCGCAGTGGATTTTCTGCAAAAGCCGGCAAGTTTTGAACA
GCTAAAACAGGCGATTGCACAGGCGGAAAAAGTAAGTGAAAAAGCGGTGAAAATTCGTGAAATTTCGCAAAATTACGCCA
AATTGACGGAAAAAGAGCGTAACCTTGTGCCACTGATTATGCAAGGTTTCACCAATAAACAGATCGCAGATAAATTAGCG
ATTTCAGTGCGTACGGTGGAAGTACATCGAGCCAATGTGATGGAAAAAATGCAGGCGGAGAGTTTGGCGGGGCTGGTGCA
GATGATCGGGGAGTTACAATATAAAGGTAGCGGAAATTGCTCTGCTACCTTTAGTTTCGACTTTTGCCGTATTAATTTAC
TTCTTTAA

Protein sequence : 
MIIHILDDEESILDAMSFLLAPLGVEIQTWQSSLDFLAQADLHRQGVLLLDIRMPLPDGQQVHQQLREAQSTLAVVIMTA
HGDVPMAVAELKKGAVDFLQKPASFEQLKQAIAQAEKVSEKAVKIREISQNYAKLTEKERNLVPLIMQGFTNKQIADKLA
ISVRTVEVHRANVMEKMQAESLAGLVQMIGELQYKGSGNCSATFSFDFCRINLLL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ttrR NP_805058.1 two-component response regulator Virulence SPI-2 Protein 2e-47 55
ttrR CAB37412.1 TtrR Virulence SPI-2 Protein 1e-47 55
ttrR YP_216395.1 tetrathionate reductase complex: response regulator Virulence SPI-2 Protein 2e-47 55
ttrR NP_456141.1 putative two-component response regulator Not tested SPI-2 Protein 2e-47 55
ttrR NP_460352.2 response regulator Virulence SPI-2 Protein 1e-47 55

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
N220_03675 YP_008338194.1 Tetrathionate response regulatory protein TtrR VFG0488 Protein 5e-48 55