Gene Information

Name : N220_02700 (N220_02700)
Accession : YP_008338000.1
Strain : Mannheimia haemolytica USMARC_2286
Genome accession: NC_021883
Putative virulence/resistance : Virulence
Product : periplasmic chelated iron-binding protein yfeA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 535018 - 535914 bp
Length : 897 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence : 
ATGAAACTATCAACAATTAAAAAAGCATTGGTATTAACCTTTGGTTTAAGTGCAGCGATGGCAATGGCAGAGCCGTTTAA
AGTAGTTACCACTTTTACCGTGATTCAAGATATTGCACAAAATGTCGCCGGCGATAAAGCCACTGTGGAATCCATTACTA
AACCGGGTGCTGAAATTCACGATTATCAACCAACACCAAAAGACATTGTAAAAGCTCAAAAGGCAGACTTAGTGTTATGG
AACGGTATGAACCTTGAGCGTTGGTTTGAACGTTTCTTTGAAAATGTAAAAGGTAAACCGGCGGTTGTCGTCACCGAAGG
CATCACCCCAATGCCGATTACCGAAGGTGAATATAAAAATCTACCAAATCCGCACGCTTGGATGTCCACCGATAACGCAT
TAATTTACATTGAAAATATTCGTGCGGCTTTAGTAAAATATGACCCACAAAACGCAGACACCTATAATGCCAATGCAAAA
GCCTATGCTGAAAAAGTAAAAGGTATTGCTGAGCCACTCCGCCAACGTTTAGCTTTTATTCCTGAGCAGCAACGTTGGTT
AGTAACCAGTGAAGGGGCATTTAGCTATTTAGCGAAAGACTACAACTTAAAAGAACTTTATTTATGGGCAATCAATGCGG
AAGAGCAAGGTTCGCCAAAACAAGTGAAAAAAGTGATTGATGGTGTAAAAGCCAACAAAATCCCTGTTGTGTTTAGCGAA
AGTACCGTTTCCGACAAACCGGCAAAACAAGTGGCGAAAGAAACCGGTGCATTATACGGTGGCGTAATTTATGTGGATTC
ACTTTCAGAGAAAGATGGTCCGGTTCCAACCTATTTAGATTTGCTTAAAGTGACTATCGGCACCATTGTCGAAGGGTTCG
AACGAAGCAAAAAATAA

Protein sequence : 
MKLSTIKKALVLTFGLSAAMAMAEPFKVVTTFTVIQDIAQNVAGDKATVESITKPGAEIHDYQPTPKDIVKAQKADLVLW
NGMNLERWFERFFENVKGKPAVVVTEGITPMPITEGEYKNLPNPHAWMSTDNALIYIENIRAALVKYDPQNADTYNANAK
AYAEKVKGIAEPLRQRLAFIPEQQRWLVTSEGAFSYLAKDYNLKELYLWAINAEEQGSPKQVKKVIDGVKANKIPVVFSE
STVSDKPAKQVAKETGALYGGVIYVDSLSEKDGPVPTYLDLLKVTIGTIVEGFERSKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitA NP_457255.1 Iron transport protein, periplasmic-binding protein Virulence SPI-1 Protein 1e-92 66
sitA NP_806464.1 iron transporter periplasmic-binding protein Virulence SPI-1 Protein 1e-92 66
sitA NP_461782.1 periplasmic binding protein Virulence SPI-1 Protein 1e-92 66
sitA AAD41065.1 SitA Virulence centisome 63 pathogenicity island Protein 1e-92 66
sitA YP_217781.1 iron transporter: fur regulated Virulence SPI-1 Protein 6e-93 65

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
N220_02700 YP_008338000.1 periplasmic chelated iron-binding protein yfeA BAC0439 Protein 2e-98 73
N220_02700 YP_008338000.1 periplasmic chelated iron-binding protein yfeA BAC0349 Protein 6e-93 66

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
N220_02700 YP_008338000.1 periplasmic chelated iron-binding protein yfeA VFG0525 Protein 6e-93 66