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Name : N220_13955 (N220_13955) Accession : YP_008340176.1 Strain : Mannheimia haemolytica USMARC_2286 Genome accession: NC_021883 Putative virulence/resistance : Virulence Product : sugar ABC transporter substrate-binding protein Function : - COG functional category : - COG ID : - EC number : - Position : 2653439 - 2654623 bp Length : 1185 bp Strand : + Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+. DNA sequence : ATGAAACAAAAAAAATTAAATACTACATTATTATTTATAACATTATCATTAATTTCAGCCTGCTCTAGCCTACCAACGTC CGGCCCAAGCTATAGCGAAATCTTAGCAAGTAATGAAAATACAGCTGAAACGCAGTTGCCTGAAGTCAATTTAATCAAGT TAGATAACATCACCGTACAAAACTTATACCAAGAGCAACAATCTCAACGTTTTTCAGGATTTGATGGCTCAATGGGTGTG GGTGGTTATGCTGGAACAGTTAATGTAGGCGATATATTAGAAATATCCATTTGGGAAGCGCCACCTGCCGTGCTATTTGG TGGAACATTTAGTGCTGAAGGGCAAGGTAATGGGCATTTAACCCAATTACCTCAGCAAATGGTGAACAAAAATGGAACGG TAACTGTGCCTTTTATCGGTAATATTAAAGTTGCTGGAAAAACACCTGAAGTAATTCAGAATCAAATTGTCGGAGCATTG AGCCGTAAAGCTAATCAACCTCAAGCATTAGTTCGTATTGCGAATAACTTGTCGTCTGATGTTACGGTTATCCGCCAAGG AAATAGCATTCGTATGCCATTAAGTGCCAATAATGAGCGTATTTTAGATGCAGTTGCGGCAGTAGGTGGTACAAGCGAAA ATATTGAAGATGTAACAGTTCGTTTAACACGTGGAAATAAAGTGCGTTCAATGGCGTTTGAAACATTAATTGCTGACCCC TCACAAAATATTACATTACGTTCAGGTGATGTTATTGCTTTAATGAATACTCCTTATAGCTTTACCGGATTAGGAGCAGT AGGTAATAATCAACAAATGCGTTTTTCAAGTAAAGGCATTACCCTTGCTGAAGCTATCGGTAAAATGGGAGGATTAATTG ATGAGCGTTCAGACCCTCGTGGTGTGTTCGTATTCCGCCATATTCCTTTTACACAATTAGATTACGATAACCAAGCTCAA TGGCGTGAAAAAGGTTATGCAGAGGGAATGGACGTTCCAACTGTTTATCAGGTGAATTTATTAAAACCGCAATCAATGTT TTTATTGCAGCGTTTCCCTATTCAAGATAAAGATATTGTATATGTGTCGAATGCTCCACTGTCTGAATTTCAAAAATTCT TGAGAATGATTTTCTCCATTACTACACCAATTACAGGTACAGCTAATACAATTAGAGCGTACTAA Protein sequence : MKQKKLNTTLLFITLSLISACSSLPTSGPSYSEILASNENTAETQLPEVNLIKLDNITVQNLYQEQQSQRFSGFDGSMGV GGYAGTVNVGDILEISIWEAPPAVLFGGTFSAEGQGNGHLTQLPQQMVNKNGTVTVPFIGNIKVAGKTPEVIQNQIVGAL SRKANQPQALVRIANNLSSDVTVIRQGNSIRMPLSANNERILDAVAAVGGTSENIEDVTVRLTRGNKVRSMAFETLIADP SQNITLRSGDVIALMNTPYSFTGLGAVGNNQQMRFSSKGITLAEAIGKMGGLIDERSDPRGVFVFRHIPFTQLDYDNQAQ WREKGYAEGMDVPTVYQVNLLKPQSMFLLQRFPIQDKDIVYVSNAPLSEFQKFLRMIFSITTPITGTANTIRAY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ctrA | NP_273135.1 | capsule polysaccharide export outer membrane protein | Not tested | IHT-A | Protein | 3e-97 | 53 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| N220_13955 | YP_008340176.1 | sugar ABC transporter substrate-binding protein | VFG0699 | Protein | 3e-143 | 75 |
| N220_13955 | YP_008340176.1 | sugar ABC transporter substrate-binding protein | VFG0687 | Protein | 3e-143 | 75 |
| N220_13955 | YP_008340176.1 | sugar ABC transporter substrate-binding protein | VFG0255 | Protein | 1e-97 | 53 |
