Gene Information

Name : N220_13795 (N220_13795)
Accession : YP_008340151.1
Strain : Mannheimia haemolytica USMARC_2286
Genome accession: NC_021883
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2618586 - 2619479 bp
Length : 894 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence :
ATGGCTGAGCTTGACCCTATTATTGAACAATTTCTCGATACACTATGGCAAGAACACGGTTTGTCTGAAAATACCGTTGC
CTCTTATCGTTCTGACTTAGAGCGTTTTTCCGATTATTTTTCTGAACCTAAAGCATTTCTGTCTCTCGATCATATCGACT
TACAAGGTTTTCTCGGCGAGCGTTTGGAGCAAGGCTATAAGGCGACAAGCTCTGCCAGAATGTTGAGTTGTTTAAGGAAA
TTTTTCCGTTTTTTATGCCTTGAGCATTATCGCCAAGATGACCCGACTTTAACCCTTTCTTCCCCTAAACGGGGTGCTTC
TTTACCCAAATCCTTAAGTGAAGATCAGGTAATGGATTTGCTAGATGCCCCGAATACGTTAGATCCGATAGAGTTACGGG
ATAAAGCAATGCTGGAGCTGCTGTATGCCACCGGTCTGCGGGTAACGGAGCTGGTGTCGCTTTCGATGGATAATATCAGC
CTCAAACAAGGGGTGGTGAGAATTATCGGTAAAGGGGATAAAGAGCGGTTAGTGCCATTGGGCGAGGAGGCGAATTATTG
GATACAGGAGTTTTTCCAGTACGGTCGCCCTATTTTGCTGAATAATCAGCAGTCTGATGTTGTATTTCCGAGCCGGCGAG
GTCAGCAGATGACAAGGCAGACGTTTTGGCATCGGATTAAGCACTATGCCGTGCTTGCAGGTATTGATGCAGATAAACTC
TCGCCTCACGTGCTTCGCCACGCCTTTGCGACCCATTTGGTCAATCATGGGGCTGATTTGCGAGTGGTACAGATGTTGCT
GGGGCATAGTGATTTATCGACCACCCAGATTTACACTCAAGTGGCAAAAGCCCGTTTGAAATCGCTTCATCAGCAATTTC
ACCCTAGAGGATAG

Protein sequence :
MAELDPIIEQFLDTLWQEHGLSENTVASYRSDLERFSDYFSEPKAFLSLDHIDLQGFLGERLEQGYKATSSARMLSCLRK
FFRFLCLEHYRQDDPTLTLSSPKRGASLPKSLSEDQVMDLLDAPNTLDPIELRDKAMLELLYATGLRVTELVSLSMDNIS
LKQGVVRIIGKGDKERLVPLGEEANYWIQEFFQYGRPILLNNQQSDVVFPSRRGQQMTRQTFWHRIKHYAVLAGIDADKL
SPHVLRHAFATHLVNHGADLRVVQMLLGHSDLSTTQIYTQVAKARLKSLHQQFHPRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 9e-56 56
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 9e-56 56