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Name : sgbE (N220_13315) Accession : YP_008340061.1 Strain : Mannheimia haemolytica USMARC_2286 Genome accession: NC_021883 Putative virulence/resistance : Unknown Product : L-ribulose-5-phosphate 4-epimerase Function : - COG functional category : - COG ID : - EC number : 5.1.3.4 Position : 2530711 - 2531430 bp Length : 720 bp Strand : - Note : catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate; links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source DNA sequence : ATGACGCAATTAACTGAATTAACCCCTGCATTACAAGCCTTAAGAGAGCGTGTGTTAAAAGCCAATTTAGAATTACCGAA GTATGGCTTGGTAACTTTCACTTGGGGTAACGTAAGTGAAATCGACCGTGAGACCGGTTTAGTCGCCATCAAACCTTCCG GCGTAGAATACGATGCGATGACGGTGGAAGACATTGTATTGGTTGATTTACAAGGTAATCGAGTTTACGGAGATAAAAAA CCGTCTTCTGATACAGAAACGCACTTAGAACTTTATCGCCAATTCACTGATATTGGCGGTGTGGTACACACTCACTCTCG CAATGCTGTAGGTTGGGCACAAGCAGGGCGTGATTTATTGGCACTTGGCACCACTCAAGGCGATTATTTCTACGGTGCGA TTCCTTGTACTCGCAAAATGACCGCAGAGGAAATTGCCGGCAGTTATGAGCTGGAAACCGGAAAGGTGATTGTCGAAACT TTCCGAACTCGAGGTATTGAACCGAAAGCAGTTCCAGGTGTGTTGGTACATTCACACGGTCCATTTACCTGGGGAAAAGA TGGACACGATGCTGTGCATAATTCTGTGGTATTAGAAGAGGTGGCTTACATGAATTTTATTAGCCATCAAATTCGCCCAC AAATTGGCCCAATGCAACAGGAATTATTAGATAAGCATTATCTGCGTAAGCATGGTGCAAATGCTTATTATGGGCAATAG Protein sequence : MTQLTELTPALQALRERVLKANLELPKYGLVTFTWGNVSEIDRETGLVAIKPSGVEYDAMTVEDIVLVDLQGNRVYGDKK PSSDTETHLELYRQFTDIGGVVHTHSRNAVGWAQAGRDLLALGTTQGDYFYGAIPCTRKMTAEEIAGSYELETGKVIVET FRTRGIEPKAVPGVLVHSHGPFTWGKDGHDAVHNSVVLEEVAYMNFISHQIRPQIGPMQQELLDKHYLRKHGANAYYGQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| araD | YP_281517.1 | L-ribulose-5-phosphate 4-epimerase | Not tested | Not named | Protein | 2e-66 | 60 |
