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Name : N220_12515 (N220_12515) Accession : YP_008339917.1 Strain : Mannheimia haemolytica USMARC_2286 Genome accession: NC_021883 Putative virulence/resistance : Unknown Product : catalase Function : - COG functional category : - COG ID : - EC number : - Position : 2380637 - 2382145 bp Length : 1509 bp Strand : + Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+. DNA sequence : ATGTCTAAATGTCCTGTTACACATTTGACAATGAACAACGGTGCACCTGTTGTTGATAACCAAAACAGCTTAACAGCGGG TCCACGTGGTCCATTATTAGCGCAAGATTTATGGTTAAATGAAAAATTAGCGAACTTCGTGCGTGAAGTCATTCCTGAGC GTCGTATGCACGCTAAAGGTTCCGGTGCGTTCGGTACTTTCACTGTAACTAACGACATCACTAAATACACTCGTGCGGCA ATTTTTAGCCAAGTCGGTAAAAAAACTGAAATGTTTGCTCGTTTCACCACCGTTGCAGGTGAACGTGGTGCGGCAGATGC TGAGCGTGATATTCGTGGTTTCGCATTAAAATTCTATACCGAAGAAGGTAACTGGGATATGGTGGGTAACAACACCCCTG TGTTCTTCTTACGTGACCCACGTAAATTCCCGGATTTAAACAAAGCGGTTAAACGTGACCCACGCACGAATATGCGTTCT GCAACTAACAACTGGGATTTCTGGACATTATTACCAGAAGCATTTCACCAAGTGACTATTGTAATGAGTGAACGTGGTAT TCCGGCTTCATATCGTCATATGCACGGTTATGGCTCACATACTTATAGCTTCATCAATGCAGCTAATGAGCGTTTCTGGG TGAAATTCCATTTCCATACACAACAAGGCATTAAAAACTTAACTAACGAAGAAGCAGCCGCTATTATCGCTAACGATCGT GAAAGTCACCAACGTGATTTATACGAAGCGATTGAGCGTGGCGATTTCCCGAAATGGAAAATGTTTGTTCAAATTATGCC TGAAACTGATGCAGACAAAGTACCATACCACCCGTTCGATTTAACTAAGGTATGGCCGAAATCAGACTATCCGTTAATTG AAGTGGGTGAGTTTGAATTAAATCGTAACCCTGAAAACTTCTTTGCTGATGTGGAACAATCTGCATTCGCACCAAGTAAC TTAGTGCCGGGCATCAGCGTGTCTCCAGACCGTATGTTACAAGCTCGTTTATTCAACTATGCGGATGCTCAACGCTACCG TTTAGGTGTGAACCACCACCAAATCCCTGTAAACGCTCCACGTTGCCCGGTTCATAGCAACGCTCGTGACGGTCAAGGTC GTGTGGACGGTAACTACGGTAGTACCATTCACTACGAACCAAACAGCTTCGGCAAATGGCAAGAACAAGCTCAATATGCA GAGCCACCACTGAAAATTAATGGTGATGCAGCCCACTGGAACTATCGTGAAGACGATGCTGACTACTTCAGCCAACCACG TGTATTGTTCAATATGATGAATGATGAACAAAAACAAGCATTATTCAATAATACTGCTGCAGGTATGGGCGATGCATTAG ACTTCATTAAATACCGTCATATTCGTAACTGCTATGCCTGTGATCCGGCATATGGTGAAGGTGTGGCAAAAGCATTAGGT ATGACGGTTGAAGATGCTATTGCTGCAAGAGCAACAGACCCAGCATTAGGTCAACCGGGTTTACTCTAA Protein sequence : MSKCPVTHLTMNNGAPVVDNQNSLTAGPRGPLLAQDLWLNEKLANFVREVIPERRMHAKGSGAFGTFTVTNDITKYTRAA IFSQVGKKTEMFARFTTVAGERGAADAERDIRGFALKFYTEEGNWDMVGNNTPVFFLRDPRKFPDLNKAVKRDPRTNMRS ATNNWDFWTLLPEAFHQVTIVMSERGIPASYRHMHGYGSHTYSFINAANERFWVKFHFHTQQGIKNLTNEEAAAIIANDR ESHQRDLYEAIERGDFPKWKMFVQIMPETDADKVPYHPFDLTKVWPKSDYPLIEVGEFELNRNPENFFADVEQSAFAPSN LVPGISVSPDRMLQARLFNYADAQRYRLGVNHHQIPVNAPRCPVHSNARDGQGRVDGNYGSTIHYEPNSFGKWQEQAQYA EPPLKINGDAAHWNYREDDADYFSQPRVLFNMMNDEQKQALFNNTAAGMGDALDFIKYRHIRNCYACDPAYGEGVAKALG MTVEDAIAARATDPALGQPGLL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| katA | ABD94664.1 | catalase isozyme A | Not tested | ExoU island A | Protein | 5e-160 | 68 |
| katA | YP_005126717.1 | catalase | Not tested | Not named | Protein | 1e-93 | 53 |
| katA | YP_005680448.1 | catalase | Not tested | PiCp 3 | Protein | 1e-89 | 51 |
| katA | YP_005682539.1 | catalase | Not tested | PiCp 3 | Protein | 1e-89 | 51 |
| katA | YP_003782575.1 | catalase | Not tested | PiCp 3 | Protein | 1e-89 | 51 |
| katA | YP_005684630.1 | catalase | Not tested | PiCp 3 | Protein | 1e-89 | 51 |
