Gene Information

Name : N220_11080 (N220_11080)
Accession : YP_008339643.1
Strain : Mannheimia haemolytica USMARC_2286
Genome accession: NC_021883
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2116372 - 2117079 bp
Length : 708 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence : 
ATGAATAATAAGAACGGAAATAAAATGACAGAATTACTTCGCTGTGAACATATCAGCAAATTTTACGATGAGGGCGAACA
GAAAGTTCAGGTGCTAAAAGAGGTGTCATTTTCGATGAACGAAGGTGAGCTGGTAGCGATTGTCGGTAGTTCAGGTTCCG
GCAAAAGCACCCTATTGCACACATTAGGCGGGCTAGATCAGCCAAGCACCGGTGAAGTCTGGATTCGAGGGCAATCTCTG
CAACAGCTCAGTTCAGACAAATTAGCGTTATTGCGTAACCAAAACTTAGGCTTTGTGTACCAATTTCATCACTTAATGGC
AGACTTTACCGCCCTTGAAAATGTGATGATGCCGATGCTGATCGGCAAACAGAACAAAACTGAAGCTGCCAATCGTGCCG
AGAAAATGCTACAAGCGGTCGGATTAGCTCATCGAATGACACATCGCCCATCAGCACTTTCAGGCGGCGAACGCCAACGG
GTGGCGATTGCCCGAGCGTTGGTTAATAATCCGGCTCTGGTACTTGCCGATGAACCGACCGGTAATTTAGACCAAAAAAC
CACTGAAAGCATTTTTGAGCTGATTCAACAGCTCAACCAAGAGCAGAACATTGCGTTTTTATTAGTAACGCATGATTTAA
ATCTAGCGAATAAACTTTCACGTAGTCTTGTAATGCGAGATGGCGTGTTAAGCGAGGGGAGCTTATGA

Protein sequence : 
MNNKNGNKMTELLRCEHISKFYDEGEQKVQVLKEVSFSMNEGELVAIVGSSGSGKSTLLHTLGGLDQPSTGEVWIRGQSL
QQLSSDKLALLRNQNLGFVYQFHHLMADFTALENVMMPMLIGKQNKTEAANRAEKMLQAVGLAHRMTHRPSALSGGERQR
VAIARALVNNPALVLADEPTGNLDQKTTESIFELIQQLNQEQNIAFLLVTHDLNLANKLSRSLVMRDGVLSEGSL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-33 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-34 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-34 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-34 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
N220_11080 YP_008339643.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 7e-43 47
N220_11080 YP_008339643.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 3e-37 44