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Name : N220_10950 (N220_10950) Accession : YP_008339617.1 Strain : Mannheimia haemolytica USMARC_2286 Genome accession: NC_021883 Putative virulence/resistance : Unknown Product : peptide ABC transporter ATPase Function : - COG functional category : - COG ID : - EC number : - Position : 2087169 - 2088764 bp Length : 1596 bp Strand : + Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+. DNA sequence : ATGGAATTATTAGCAGTAAATAATCTCGATGTTTATTTAAAAACGGACGAAGAATTAGTTCACGCAGTGCGTAATGTCTC GTTCTCGATTGAAAAAGGGCAAACCCTTGCGATTGTGGGGGAATCGGGTTCGGGTAAATCCGTTACTTCAATGGCAATTA TGCAGTTATTGCCTAAAAATATCGTCTCATTCGGTGAACGCTCAAGCATCATTTTTGAAGAACAAAACTTGCTTACTCTA TCTGAAAAAGCAATGCAAACAGTTCGAGGTGATCGCATCGGTATGATTTTCCAAGAGCCAATGACCTCACTCAATCCTTA TATGCCGATTGGCAAGCAGGTTGCTGAGACGGTTCAAACCCATAATCCGCAAATCAGCAATGCCGAAGCGGAAAAAATGG TGTTGGAAACTTTGCAAAAAGTAAAAATTCCCGATGCGGAAAAGAAAATGATTTGCTATCCGCACGAGTTTTCCGGCGGT CAGCTACAACGAATTATGATTGCAATGGCAATTATCAACAAACCCGATTTATTGATTGCCGATGAGCCGACCACCGCCCT GGATGTCACAACCCAAGCGGAAATTTTGGATTTAATGCACGACTTACAGCGTGATATGGGAATGGCGATTATCTTAATTT CCCACGATTTACGCTTGGTGCATAAATACAGTGACTTAGTCTGCGTAATGCAAAACGGCGAAATTATTGAGCGAGGCGAA ACGGAAACTGTGTTCACCAATCCGCAACATCCTTATACGGTGGAGCTACTTACCCCGATTCCAACTAATTTAAAAGGGGA ATTACCGCCAAATGCACCAACCTTGCTTCAGGGTGAGCATATTAAGGTAGATTATATTTTAAAACGCTCGCTATTCGGTA AGCCGAAAAAGGTGTTTAATGCGTTAAAAGATATTTCATTGCACTTGAAAACCGGCGAAACGCTCGGCATTGTAGGCGAA TCCGGCTCCGGGAAATCTACCCTTGGGCGTGCCATTATGCAGATTTTAGATTATCGCGGCAATATTACATTTGCAGGTAA GACACTGGCTAATCTGAATAAAGCCGAACGTCAAGCCCTGAAAAAAGATATGCAAATGGTGTTCCAAGACCCGTTCAACT CACTTTCTCCTCGCTTAACAGTTGGGGAAATTATTGCTGAGGGCTTAACCGTACATTGCCCTCAAATGAGCAAAACCGAA CGGCGGGAAAAAGTAATGAAAATGTTGGAAGAGGTTAATCTCAACCCTGCAATGATTAACCGCTATCCGCACGAATTTTC GGGCGGACAACGCCAGCGGATTGCGATTGCAAGGGCAATCATTTTAGAGCCGAAATTTGTATTGCTTGATGAGCCAACCT CAGCACTTGACCGCTCTACTCAGATCACTGTAATTGAATTGCTTAACCGCTTACAGAAAAAATACGGCTTAAGTTATATT TTCATCAGCCACGATTTGGCGGTCATCAAGGCACTTAGCGACCGAGTGATTGTAATGAGCCAAGGTGAGATTGTAGAAAG CGGTGATGTCACTCAAATTTTTGAAAATCCACAACAAGAATACACCAAGCGGTTGATTTTAGCCTCTAATTTGTAA Protein sequence : MELLAVNNLDVYLKTDEELVHAVRNVSFSIEKGQTLAIVGESGSGKSVTSMAIMQLLPKNIVSFGERSSIIFEEQNLLTL SEKAMQTVRGDRIGMIFQEPMTSLNPYMPIGKQVAETVQTHNPQISNAEAEKMVLETLQKVKIPDAEKKMICYPHEFSGG QLQRIMIAMAIINKPDLLIADEPTTALDVTTQAEILDLMHDLQRDMGMAIILISHDLRLVHKYSDLVCVMQNGEIIERGE TETVFTNPQHPYTVELLTPIPTNLKGELPPNAPTLLQGEHIKVDYILKRSLFGKPKKVFNALKDISLHLKTGETLGIVGE SGSGKSTLGRAIMQILDYRGNITFAGKTLANLNKAERQALKKDMQMVFQDPFNSLSPRLTVGEIIAEGLTVHCPQMSKTE RREKVMKMLEEVNLNPAMINRYPHEFSGGQRQRIAIARAIILEPKFVLLDEPTSALDRSTQITVIELLNRLQKKYGLSYI FISHDLAVIKALSDRVIVMSQGEIVESGDVTQIFENPQQEYTKRLILASNL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 4e-74 | 41 |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 4e-74 | 41 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 4e-74 | 41 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 4e-74 | 41 |
