Gene Information

Name : potB (N220_10930)
Accession : YP_008339613.1
Strain : Mannheimia haemolytica USMARC_2286
Genome accession: NC_021883
Putative virulence/resistance : Unknown
Product : putrescine/spermidine ABC transporter permease
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2083491 - 2084354 bp
Length : 864 bp
Strand : +
Note : can transport spermidine and putrescine but affinity is higher for spermidine; forms a complex of PotA2BCD; PotB is a membrane component; Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence :
ATGAAGGCGAATAACAAATTCCAAAATGGTGCGGTCGCAACTATTTTCGGTTGGTTATTACTTTTCGTATTAGTGCCGAA
CGTACTCGTTTTAATCATCAGCTTCTTAACAGAAAACCGTCAAAGTCAGTATTTTGTGGACTTTGCATTTAGTTTTGATG
CTTATAAATCACTGTTTAATGACACCTATGCAGCAGTATTGTGGAACTCGCTATATATGGCGGGCATTGCCACCTTTTTC
TGTTTGATCATCGGCTATCCCTTTGCATTTTTTATTGCCAAAATGCCGGAAAGAATTCGTCCGTTTTTACTGTTTTTAGT
AGTTCTACCGTTTTGGACTAACTCACTGATTCGTATTTATGGCATTAAGATTTTCTTAGGCGTAAAAGGCTTTTTAAATG
AAAGCTTGATGGCTTTAGGTATAATCAGCGAGCCAATGCGTTTATTAAACTCAGAAATTGCGATTATTATTGGTTTAGTT
TACATTCTATTACCTTTTATGATTCTACCGCTTTATTCATCAATCGAGAAAATTGATAACCGCTTACTAGAAGCTGCAAA
AGACTTAGGTGCAAACGCCTTCCAGCGTTTTATTAAAGTGACTATTCCATTAACAATGCCGGGCATTGTCGCAGGTTGTT
TATTAGTATTACTTCCGGCAATGGGTATGTTCTATGTGGCAGATTTATTAGGCGGCGGTAAAACACCGTTAGTAGGTAAC
ATTATTAAGAGCTTGTTCTTAAATACCAACCAATTTGCATTAGGTTCAGCAGTAAGTATTGCATTAACTATCTTAATGGC
ATTAATGCTTTATGTTTACTATCGTGCAAACAAATTATTAAATAAAAAGGTGGAGCTTGAATAA

Protein sequence :
MKANNKFQNGAVATIFGWLLLFVLVPNVLVLIISFLTENRQSQYFVDFAFSFDAYKSLFNDTYAAVLWNSLYMAGIATFF
CLIIGYPFAFFIAKMPERIRPFLLFLVVLPFWTNSLIRIYGIKIFLGVKGFLNESLMALGIISEPMRLLNSEIAIIIGLV
YILLPFMILPLYSSIEKIDNRLLEAAKDLGANAFQRFIKVTIPLTMPGIVAGCLLVLLPAMGMFYVADLLGGGKTPLVGN
IIKSLFLNTNQFALGSAVSIALTILMALMLYVYYRANKLLNKKVELE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
potB BAA36746.1 - Not tested LIM Protein 6e-68 60