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Name : N220_10675 (N220_10675) Accession : YP_008339562.1 Strain : Mannheimia haemolytica USMARC_2286 Genome accession: NC_021883 Putative virulence/resistance : Virulence Product : 3-deoxy-manno-octulosonate cytidylyltransferase Function : - COG functional category : - COG ID : - EC number : 2.7.7.38 Position : 2023441 - 2024196 bp Length : 756 bp Strand : - Note : CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS; Derived by automated computational analysis using gene prediction method: DNA sequence : ATGAAATTCACTGTAATTATTCCTGCTCGTTACGCTTCCAGCCGTTTGCCTCGTAAGCCGTTGTTGGATATTGCAGGCAA ACCGATGATTCAACACGTTTGGGAAAAAGCTCAGCTTGCCGGTGCAAGCCGTGTGATTATTGCCACCGATCACCCTGAAA TTGAAGCCCTCGCTCAATCTTTTGGGGCGGAAGTCTGTATGACTTCGGAAAAACACAATTCCGGCACTGAGCGTTTGGCG GAAGTGATCGAAAAAATGCAGATTGCCGACAGCGAAATTATTGTGAATATTCAGGGTGATGAACCGCTGATTCCACCGGT AATTGTTACTCAGGTAGCTCAAAATTTAGATGCTTATCAAGTCAATATGGCAACACTCGGTGTGAAATTAGCGACCCGAG AAGAGCTATTTAACCCAAATGCGGTGAAAGTGGTGGCAGACAAAAACGGAATGGCACTTTATTTTTCCCGAGCCAGCATT CCGTTTGCCAGAGACAGTTTTCCGGATTGTGATGACAGTTTTGTTGCCGCTCAAGGTTATTTACGCCATATCGGCATTTA CGCTTACCGAGCCGGTTTTGTGAAACAATATGTGGCGTGGCAGCCGACACAATTAGAACAGCTTGAGTCCCTTGAGCAAC TAAGAGCCTTATGGCACGGTGAAAAAATTCATATCGAACCGGCGAAAGAAGCCCCGCAAGTGGGGGTGGATACGCCGGAA GATTTGGAAAGAGTGCGAGCCATTTTAGCTCGTTAA Protein sequence : MKFTVIIPARYASSRLPRKPLLDIAGKPMIQHVWEKAQLAGASRVIIATDHPEIEALAQSFGAEVCMTSEKHNSGTERLA EVIEKMQIADSEIIVNIQGDEPLIPPVIVTQVAQNLDAYQVNMATLGVKLATREELFNPNAVKVVADKNGMALYFSRASI PFARDSFPDCDDSFVAAQGYLRHIGIYAYRAGFVKQYVAWQPTQLEQLESLEQLRALWHGEKIHIEPAKEAPQVGVDTPE DLERVRAILAR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsU | YP_854332.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | Not tested | PAI I APEC-O1 | Protein | 2e-36 | 46 |
| kpsU | AAZ04469.1 | CMP-KDO synthetase | Virulence | PAI I APEC-O1 | Protein | 2e-36 | 46 |
| kpsU | CAE85213.1 | KpsU protein | Virulence | PAI V 536 | Protein | 6e-37 | 46 |
