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Name : N220_08960 (N220_08960) Accession : YP_008339233.1 Strain : Mannheimia haemolytica USMARC_2286 Genome accession: NC_021883 Putative virulence/resistance : Unknown Product : type I restriction endonuclease HindVIIP subunit M Function : - COG functional category : - COG ID : - EC number : - Position : 1722655 - 1724031 bp Length : 1377 bp Strand : + Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+. DNA sequence : TTGGAACAGAGAGATTACTACGCCGCTGAAAACATCTTTTGGGTGCCGGAGCAAGCCCGCTGGGACAACATCAAATCATT AAGCAAACTCAATCTTGGCGATGAATTGCCTTGGGGAGACAAATTTAAAGGTGTCAGCCGCTTGATTGATGATGCCTTTG AAGCCATCGAACGGGAAAACCCCAAACTCAAAGGCGTACTCCAACGCATTGCCGGCTTTGGCGTGCCTGATGAAATGCTC ACAGGCTTAATTGACCTGTTCTCACGCACCAATTTCACCCAGCCTATGCACAATGGCGAACCTGTGCATCTGCAAGCCAA AGACATTTTAGGGCACGTCTATGAATACTTTCTTGGGCAATTTGCCCTTGCCGAAGGCAAAAAAGGCGGTCAATACTTCA CGCCAAAATCCATCGTTACCCTGATTGTTGAAATGCTCGAACCCTATTCAGGGCGGATTTACGACCCAGCTATGGGCAGC GGCGGCTTTTTTGTGCAAGCTGACCGCTTTATTCAGGCTCACGCAGGCAACCGCAACGCCATTTCCGTTTATGGGCAAGA ATCCAACTCCACCACTCGCAAACTGGCGGTGATGAATATGGCGATTCGTGGTATTCCCTTTGACTTTGGCGACAAGCCCG AAGATACCCTACTAAACCCTTTGCACATCGACAAAAAAATGGATGTTGTGATGGCAAATCCGCCCTTTAACCAAAAAGAG TGGTGGAATGAAAGCCTAGCAAACGATCCACGCTGGGCATACGGCACACCGCCGCAAGGCAACGCCAACTTTGCGTGGTT GCAACATATGATTTACCACCTCTCCCCCAAAGGCAAAATGGCACTCCTGCTCGCCAACGGCTCAATGAGCAGCCAAACTT CAGGCGAAGGCGACATTCGCAAAAACATCGTGCAAGCTGACCTTGTCGAAGCGATGATTGCCCTGCCCAATCAGCTATTC ACCAACACCCAAATCCCTGCCTGCATTTGGATTATCAATAAAGCCAAAGCCAGAAAAGGTGAAGTGCTGTTTATCAACGC CACCCAAATAGGCTACCTGAAGGACCGCGTCTTGCGTGATTTTACCGCTGATGACATCGCCAAAATCAGCGACACCTACC ACAACTGGCAAAAACAGAACGGCTACGAAAATATCCCTGCGTTTTGTTATTGTGCCACGCTGGACGAAATCGCCAAAAAC GATTTTGTGCTGACCGCAGGGCGATATGTCGGTGCGGTACAAGAAGAAAATGACGGCGTGCCGTTTGCAGAAAAAATGCA GGAATTGACCGCTTTATTGAATGAACAATTTAAACAAGGGCGGGAATTGGAACAGCAAATCGCAGAGAATTTAAAGGGGT TGGGATATGGCATTTAA Protein sequence : MEQRDYYAAENIFWVPEQARWDNIKSLSKLNLGDELPWGDKFKGVSRLIDDAFEAIERENPKLKGVLQRIAGFGVPDEML TGLIDLFSRTNFTQPMHNGEPVHLQAKDILGHVYEYFLGQFALAEGKKGGQYFTPKSIVTLIVEMLEPYSGRIYDPAMGS GGFFVQADRFIQAHAGNRNAISVYGQESNSTTRKLAVMNMAIRGIPFDFGDKPEDTLLNPLHIDKKMDVVMANPPFNQKE WWNESLANDPRWAYGTPPQGNANFAWLQHMIYHLSPKGKMALLLANGSMSSQTSGEGDIRKNIVQADLVEAMIALPNQLF TNTQIPACIWIINKAKARKGEVLFINATQIGYLKDRVLRDFTADDIAKISDTYHNWQKQNGYENIPAFCYCATLDEIAKN DFVLTAGRYVGAVQEENDGVPFAEKMQELTALLNEQFKQGRELEQQIAENLKGLGYGI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| api49 | CAF28523.1 | putative HsdM-like N-methyl transferase | Not tested | YAPI | Protein | 5e-150 | 63 |
| hsdM | YP_251979.1 | type I restriction-modification system DNA methylase | Not tested | SCCmec | Protein | 4e-106 | 48 |
| hsdM | BAH57701.1 | type I restriction-modification system DNA methylase | Not tested | Type-VII SCCmec | Protein | 1e-105 | 48 |
| hsdM | BAD24842.1 | HsdM protein | Not tested | Type-V SCCmec | Protein | 4e-104 | 47 |
