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Name : N220_08395 (N220_08395) Accession : YP_008339123.1 Strain : Mannheimia haemolytica USMARC_2286 Genome accession: NC_021883 Putative virulence/resistance : Unknown Product : DNA topoisomerase III Function : - COG functional category : - COG ID : - EC number : - Position : 1598700 - 1600751 bp Length : 2052 bp Strand : - Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+. DNA sequence : ATGAAACTGTTTATTTGTGAAAAGCCCTCTCAAGCCCGAGATCTTGCAAGTGTATTAGGTGCTACATCGAAAGGGGATGG ACTATTGGCAACTAATGATAAGTCTATTATTGTAACTTGGGGATTTGGTCATCTTGTTGAGCAATACCAACCCGAGGATT ATGATGAAGTTTGGAAACGCTGGGCATTTGAAACATTGCCGATCATTCCTGCTCAATGGAAAATGGCTCCTAAAAAAGAG TCCAAGAAACAATACAATGTAGTCATCGGATTAATTAAGAAAGCCTCTTTGGTTGTGATTGCAACCGATGCAGACAGAGA AGGTGAAATGATTGCTCGTGAACTGTTAGATTTAGCCGGATACCGAGGACAAATACAGCGTTGCTGGCTATCAGCTCTCG ATGATGCCAGTATCCGAAAAGCTCTCCAAACACTCAAATCAGGTAAAGAAACCGAGGCACTTTACTACGCTGGTATGGGA CGTAGCCGCTCGGACTGGCTGATTGGAATGAACTTCTCCCGTCTATTTACCTTAATGGCCCAAGCAAAAGGCTATTCCGG TAAGCCATTAAGCGTTGGTCGAGTGCAAAGCCCAACACTAGCTCTTGTGGTCAATCGAGACAGAGAGATTGCAAATTTCG TGCCTAAAGCTCATTACTCCTTAGCAGTTCAATTAGCAACAGCGTCTGATGAAACCTTTGTTGCCGGGCTTTCAATACCT GAACAGTATTTAGATGAATCAGGGCTTTGCCTTGATAGTCGGGTCATACAACAAGCTGAAGCTCAAATTAAACAAGTAGG CATAGCCAAAGTGATAACGGTTGAAACCAAACGAGAGAAAAAGGCACCGCCGTTGCTTTATGCATTAAGTGATTTACAAG GGGAATGTAACCGCTTGTTTGGTTTTGGGGCTCAACAAGTACTTGATATTGCTCAATCACTTTATGAGGAGCATAAAATT ACTACTTATCCCCGTACCGATTGCGGCTATCTACCTGAATCTCAGCTTACTGAAGTACCGATGGTAATTCGTTCATTAGT CGCCGCTGATTCAGAGTTACAAACTCTATTGCCTCGATTAAATCTACAACAAAAAAGTCGGGCTTGGGATGATAAAAAAA TTACTGCTCACCACGGTATTATCCCCACTATCAAAAAAGCAGATTTAAGCAAGTTAAGTGAGGAGGAGATGAAGGTCTAT GATCTCATTCGCCGTCGCTATCTCGCTCAATTCTTACCGCACTTAGAAACAGATAAAACTATAGCCACCTTGCAGTCCTC TGGACACACTCTGATTGCTAGAGGAAATGTGATCGTTTCTCAAGGTTGGCGTATCCTGTTTGGTAAAAATGCAGATGAAG ATGTTGGTAGTGATGATGAGAAACAAGGCTTACCTGCATTGACGGCAAATCAGCAATGCCGTGTTACACATTCAGAAGTC CGGACATTACAAACCAAACCACCGGCACACTATACTGAAGGAACACTACTCGAAGCAATGAAAAATGCAGCTCGCTTTGT GACTGATCCAAGACTTAAACAACGGTTGCGTGAAACGGAGGGATTGGGTACAGAGGCAACTCGTGCCGGATTGATTCAAG GGCTCATTGACAAAGGTTTTTTAATTAAGAAGAAAAAATCCCTAATGGCTTCTGCTGAAGCGATTGCCCTTATTGATAGC CTACCGGATTTATTAAAAAATCCCGGTTTAACGGCTCTTTGGGAACAGGCACTTAATCAAATTGCTGAAGGCAGTATGAC CCTTGATGACTTTATGCAACGACAAGAAACCTTTGTACGACAACTTATCGGAAATTGTATGCAACAAGGTATGTCATTGG GTAATATTGAAATTCGAAAATGCCCGGAGTGTGGTAAGCCAATGCGGAAAATCAATCACGCTAAAGGTACATTCTGGGGT TGTACAGGATATCCGGATTGCCAACATAAAGAAGCAGATAAAAAAGTCAAATCGACTTCAAATAAATCTACCAAGAAAAA TAGTAGCTTAAATGTGCTAGATCAGCTGAATAAATTAAGAAGCCAGTTATAA Protein sequence : MKLFICEKPSQARDLASVLGATSKGDGLLATNDKSIIVTWGFGHLVEQYQPEDYDEVWKRWAFETLPIIPAQWKMAPKKE SKKQYNVVIGLIKKASLVVIATDADREGEMIARELLDLAGYRGQIQRCWLSALDDASIRKALQTLKSGKETEALYYAGMG RSRSDWLIGMNFSRLFTLMAQAKGYSGKPLSVGRVQSPTLALVVNRDREIANFVPKAHYSLAVQLATASDETFVAGLSIP EQYLDESGLCLDSRVIQQAEAQIKQVGIAKVITVETKREKKAPPLLYALSDLQGECNRLFGFGAQQVLDIAQSLYEEHKI TTYPRTDCGYLPESQLTEVPMVIRSLVAADSELQTLLPRLNLQQKSRAWDDKKITAHHGIIPTIKKADLSKLSEEEMKVY DLIRRRYLAQFLPHLETDKTIATLQSSGHTLIARGNVIVSQGWRILFGKNADEDVGSDDEKQGLPALTANQQCRVTHSEV RTLQTKPPAHYTEGTLLEAMKNAARFVTDPRLKQRLRETEGLGTEATRAGLIQGLIDKGFLIKKKKSLMASAEAIALIDS LPDLLKNPGLTALWEQALNQIAEGSMTLDDFMQRQETFVRQLIGNCMQQGMSLGNIEIRKCPECGKPMRKINHAKGTFWG CTGYPDCQHKEADKKVKSTSNKSTKKNSSLNVLDQLNKLRSQL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| topB1 | YP_005176228.1 | DNA topoisomerase III | Not tested | ICEPmu1 | Protein | 0.0 | 93 |
| pph56 | CAI36097.1 | Topoisomerase IA | Not tested | PPHGI-1 | Protein | 3e-165 | 52 |
| topB | NP_458624.1 | topoisomerase B | Not tested | SPI-7 | Protein | 6e-159 | 51 |
| topB | NP_807836.1 | DNA topoisomerase III | Not tested | SPI-7 | Protein | 6e-159 | 51 |
| topB | AAF14809.1 | topoisomerase B | Not tested | SPI-7 | Protein | 4e-159 | 51 |
| topB | AAN62317.1 | putative DNA topoisomerase III | Not tested | PAGI-3(SG) | Protein | 3e-159 | 50 |
| topB | AAN62194.1 | putative DNA topoisomerase III | Not tested | PAGI-2(C) | Protein | 6e-165 | 49 |
| PMI2630 | YP_002152332.1 | DNA topoisomerase III | Not tested | Not named | Protein | 1e-148 | 47 |
