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Name : N220_08220 (N220_08220) Accession : YP_008339088.1 Strain : Mannheimia haemolytica USMARC_2286 Genome accession: NC_021883 Putative virulence/resistance : Unknown Product : integrating conjugative element protein Function : - COG functional category : - COG ID : - EC number : - Position : 1570832 - 1571773 bp Length : 942 bp Strand : + Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+. DNA sequence : ATGAAAAGAGCGTTTTTTTCGGTACTTCTCTCTGTAAGTTTAGCAGTACCAACAACCTTATATCCTCAACAGGTAAAAGC ATCATTGAATACGGCGTCGATTGCTGCATCAAGTGCCTCAACAAGCTGTTTAGACTATAAAGTCGTCGGAACGTGCTTCT GGTTATTTTGCACCTACTTTGGATGCAAGGTTCGTACATCAACCAAAATTAAGCATTATTTACCGGAAATGGTCGTTTCA TCTTATAACCAGGATGGGCAAACTCCGTGGACAGAATTACAATCTCTCAATCCTGGCGTAAAAGGCGGAGAATATCGTTC TCCGCAACGTCAATACTCTCAACTAACCTTCAAAAATGCAGATGCTTTCGGGCATCCCCAAGGAGCAATTGGTCAGTTAT TAGGAAGTACAGGCTACTATTGTAAAAGTCAAACCACACCATTTATACCCTATTTTCTAAGTGGATTAGATTTCTTTGCT TGGCGTGAAAATATGCCGGAAATGTTTTATCCGGAAGCTCTGATTCCGGGAATGCGGGAAGTTGGCCGTGTAGGCGATAG CTGGGGAAATATTTACCCACGTTCCGGTTGGGTAACACAAGCTCACGATTATAAAGCCTCTGCAACCATTGTGCAGAGAG TTGCAGACATCGTGACCCGAACTGCTCAACCACATATTTATTTCCCGGCAGCGAAAAAAGGTGGTGTTGGAGAATGGCCA CCAGGACCTGTCGAAGAAGGACAAGCCAGAACACATAAATGGCAAATGCTTTATCCTCAAATGTCAAATACCTGCTCTGT TTTTCCAAATGGGGGGCAAACAGACACCTATTCCTCTCAGATTTCAAATCAAGGTGATTATGCTTGGGCACTATGGCGAC CTTATAGTTGTTGTAAACGCCGAGGGCAAACATTCCTTTACAGTATTGATTGGTCACACTAA Protein sequence : MKRAFFSVLLSVSLAVPTTLYPQQVKASLNTASIAASSASTSCLDYKVVGTCFWLFCTYFGCKVRTSTKIKHYLPEMVVS SYNQDGQTPWTELQSLNPGVKGGEYRSPQRQYSQLTFKNADAFGHPQGAIGQLLGSTGYYCKSQTTPFIPYFLSGLDFFA WRENMPEMFYPEALIPGMREVGRVGDSWGNIYPRSGWVTQAHDYKASATIVQRVADIVTRTAQPHIYFPAAKKGGVGEWP PGPVEEGQARTHKWQMLYPQMSNTCSVFPNGGQTDTYSSQISNQGDYAWALWRPYSCCKRRGQTFLYSIDWSH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| Pmu_02990 | YP_005176198.1 | integrating conjugative element protein, PFL family | Not tested | ICEPmu1 | Protein | 3e-124 | 94 |
| pph89 | CAI36130.1 | hypothetical protein | Not tested | PPHGI-1 | Protein | 2e-62 | 52 |
| ORF SG51 | AAN62273.1 | hypothetical protein | Not tested | PAGI-3(SG) | Protein | 4e-60 | 51 |
| ORF C43 | AAN62136.1 | hypothetical protein | Not tested | PAGI-2(C) | Protein | 3e-63 | 51 |
| unnamed | ABR13357.1 | hypothetical protein | Not tested | PAGI-5 | Protein | 6e-60 | 50 |
| EXA20 | ABD94629.1 | conserved hypothetical protein | Not tested | ExoU island A | Protein | 4e-60 | 50 |
| RL017 | AAP84144.1 | conserved hypothetical protein | Not tested | PAPI-1 | Protein | 5e-60 | 49 |
| STY4576 | NP_458661.1 | hypothetical protein | Not tested | SPI-7 | Protein | 2e-61 | 46 |
| t4273 | NP_807871.1 | hypothetical protein | Not tested | SPI-7 | Protein | 2e-61 | 46 |
| YpsIP31758_3701 | YP_001402655.1 | hypothetical protein | Not tested | YAPI | Protein | 1e-58 | 46 |
| api54 | CAF28528.1 | conserved hypothetical protein | Not tested | YAPI | Protein | 8e-59 | 46 |
| YE3467 | YP_001007628.1 | hypothetical protein | Not tested | YAPI | Protein | 6e-56 | 46 |
| unnamed | AAX39458.1 | unknown | Not tested | Hrp PAI | Protein | 2e-46 | 43 |
| PMI2573 | YP_002152292.1 | hypothetical protein | Not tested | Not named | Protein | 5e-49 | 43 |
